Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0574 |
Symbol | sfsA |
ID | 4202914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 688429 |
End bp | 689121 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081459 |
Product | sugar fermentation stimulation protein A |
Protein accession | YP_695027 |
Protein GI | 110799174 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTACA ATAGTGTTAT CAGAAAAGCT ATTTTTTTAA GAAGACCAAA TAGATTTCAA GCTTATGTAG TTTTAGATGA TGAGGAGTTA TTAGTTCATG TTCCTAACAC TGGAAGGTGT AGAGAGATTT TAAAAGAAGG ATGTACAGTT CTTTTAAGAA AAGGAACTAC TCCAAATAGA AAAACTCCTT ATGATTTAAT TGCAGCTTAT AAGGGTGAGG TTTTAATAAA TATAGATTCT CAGATTCCTA ATAAAGTTGT AGAAGAGGCA TTAATAAATA AAAAGATAGA AAAGTTAGTA AATTTTAATA ATATAAGTAG AGAAAAAACT TTTGGAAATT CTAGATTTGA TTTTAAATTA CAAGATGATA ATGAAAATAC ATACTTTTTA GAAGTAAAAG GGGTAACTTT AGAGGAAAAT GGAGAGACTA GGTTTCCAGA TGCTCCAACT GAAAGAGGAA AGAAACACAT ATTAGAACTG ATTGAAATTA AAAAATTAGG AATGGGTGCA GGAATAATTT TTTTAATACA GATAGATAAT GTAAATAAGT TTTCTCCTAA TGATGAAACA GATCCTAAGT TTGGGGAAGC ATTGAGATTA GCTAAAAAAG AAAGAGTAGA TATCTTTGCA TATAATTGCA AAGTTACTGA AGAGGAAATT GAGTTACTTA ATCCTGTAGA AATAGTTTTA TAA
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Protein sequence | MKYNSVIRKA IFLRRPNRFQ AYVVLDDEEL LVHVPNTGRC REILKEGCTV LLRKGTTPNR KTPYDLIAAY KGEVLINIDS QIPNKVVEEA LINKKIEKLV NFNNISREKT FGNSRFDFKL QDDNENTYFL EVKGVTLEEN GETRFPDAPT ERGKKHILEL IEIKKLGMGA GIIFLIQIDN VNKFSPNDET DPKFGEALRL AKKERVDIFA YNCKVTEEEI ELLNPVEIVL
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