Gene CPF_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0569 
Symbol 
ID4203329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp678125 
End bp678745 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content26% 
IMG OID638081451 
Productisochorismatase family protein 
Protein accessionYP_695023 
Protein GI110801252 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGTG GAATTTATGA AAGACTTCAA TCTTTAGAAA GTTTAGATTT AAAAAGTTTA 
GATAAGAATA GAACAATGCT TTTAATAGTT GATATAAATA AAGGATTTGC TAAAGAAGGA 
GCTTTATATA GTGATAGAAT AGAGAAGTTA ATAAGTCCAA TAAGCAATTT AGCAAATTAT 
GCTTTAAATA GTGGAATAAG AGTTAAAGCC TTTACTGATT ATCATACAGA AGACTCAATA 
GAATTAAAAG CATATCCTAA GCATTGTATG AAAGATACAG ATGAATGGGA ACTTGTTGAT 
GAGTTGAACT TAGAGGGAAT AGAAGTTATA AAGAAAAATT CAACAAATGG ATTTTTAGAG 
GAGAATTTCA TATTAAATAA AGAAGAGATA GACAATGTAA TAATAGTAGG AGATTGTACA 
GATATATGTA TTTATCAATT AGCTATAAGC TTAAGAGCAG AGTTTAATAG AGTTAATAAA 
GATGGAGAGA TATATGTACC AAAAAAACTT GTAGATACAT TTGATATGCC TATGCATAAA 
GCTAATTTTA TGAATTATGT ATTTTTAAAC TCTATGCTTG ATAATGGTGT GAAGGTTATT 
GAGGATATTA TTTTAGATTA G
 
Protein sequence
MISGIYERLQ SLESLDLKSL DKNRTMLLIV DINKGFAKEG ALYSDRIEKL ISPISNLANY 
ALNSGIRVKA FTDYHTEDSI ELKAYPKHCM KDTDEWELVD ELNLEGIEVI KKNSTNGFLE 
ENFILNKEEI DNVIIVGDCT DICIYQLAIS LRAEFNRVNK DGEIYVPKKL VDTFDMPMHK 
ANFMNYVFLN SMLDNGVKVI EDIILD