Gene CPF_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0562 
Symbol 
ID4202135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp670467 
End bp671099 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content28% 
IMG OID638081444 
Producthypothetical protein 
Protein accessionYP_695016 
Protein GI110798904 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATT TAAATCCTAA AGACGATAAA TTTTATGATA TGTTTATCGA TGAAGCAAAA 
AATGTAGAAA AAGCAGCAGT AATATTAAGT GAAGCCTTAG GGGATCTTGA AAATAAAACA
AGCCACGTGG CTAGAGTTGA AGAGTTAGAA CATAAAGGAG ATGAAATAGT TCATAGACTT
ATAGAAGAAC TAAACAATTC TTTTATAACT CCTATTGATA GAGAAGATAT ATTTTCTATA
ACAAAAAGAA TGGATGATAT TTTAGATTCA ATAGAAAGTA CTATGCATAG ATTCACTATG
TTCAACATAA ATGAATCTAA AGAAGGTGCT AAAGTTTTAG GAAGCTTAAT AGTTGATGCA
TCAAGAGAAT TAGTATCTCT AATGGAAGAA TTTAAGCATA TGAAAAAGAA AAATAAAGAA
ATTACAGAGA GAGTAATTTC AATAAATAAA ATAGAAAACA AAGGAGATAT TTTCTATAGA
CAAATGATAT CAGAATTATT TGCTGAAGAT GGAAAAACTC CAGTTCTTGA TATAATAAAA
TGGAGAGAAA TATATAAATT CTTAGAGGCA ACTTTAGATA GTTGTGAGGC TGTAGCCAAT
ATAGTTGAGG GAGTAGTGAT GAAGTATGTC TAG
 
Protein sequence
MFNLNPKDDK FYDMFIDEAK NVEKAAVILS EALGDLENKT SHVARVEELE HKGDEIVHRL 
IEELNNSFIT PIDREDIFSI TKRMDDILDS IESTMHRFTM FNINESKEGA KVLGSLIVDA
SRELVSLMEE FKHMKKKNKE ITERVISINK IENKGDIFYR QMISELFAED GKTPVLDIIK
WREIYKFLEA TLDSCEAVAN IVEGVVMKYV