| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0554 |
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| Symbol | |
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| ID | 4203935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 660619 |
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| End bp | 662370 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638081436 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_695008 |
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| Protein GI | 110800843 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGAAAA TAATAAAGAA AATAACAAAT ACCTTAAGAG GAATATCAAA TTTTCTTAGA
AAAACTTCTA TTAAAAATAG ACTTATAGCA TCATTTTCTG TAGGAATAAT TTTTTGTAGT
AGTATTTTAG GCATACTCCT ATATAAAAAG GCTACCAATG CATTGAAGAA TAATGCAATA
AATTATTCGG AAAATATGCT TTCTATCATG AGTGAAGACA TTTACAAAAA TAAAGAATTC
TTAGAAAGAG CATCTATTGA ATTATCAATG AATGAAGAAA TAGCTAATAA TCTTATAAAT
TACAAATTTA TGGATGGAAA AGAAAAGAAT GGATTTTTAA AGTATATGAA TGATTACTTG
TCTAAAAAAC TTTCTCTTTT ACCTAATCTA GCAGAGGTTG AAATAATATC AAAGGATTAT
GAAGTCACTT ATATGCAAGG TTTTAAATAT TTTAAGAGAG AAGATATAGA AAGGTATGCA
GATGAATCTG AAAATGGACT ATTTTGGTTT TCTACAATTT TAAATAATGA ACCTCACATA
TGCATAGTAA CTCCAGTGAA GCAGGATAAT AGTATTGTGG GATATGTTTT CATGGCTATA
AAAAGTGAAG TTTTTGCTTC TTCTTTTTCT CTTTTTAATA TTGGTAAAGG CAGTGAAATT
TTTATAATAG ATGATAAGAA TAACATAATA ATTTCTGAAA ATAATTTAAA TAGTAATTTT
ATATTAGAGG AGACAGATTT AAATAAGTTC CTTAAAGATA AAGGGGCTAA GGATACAGCA
AGGAGTATAG TGGTAAATGG AGAAAATTAT GTAGCTACAT ATAGAAAATT AAAGGGATTT
AATTGGTATA TAGCTTCAAT GACCCCTTAT GATTTTATAA ATGCTGATAT TCAAAGTTTA
AGGAAGGAAA TGACTATAAT AGGATTACTT TTCACTTTAG TGGTATTAAT ATTTTCATAT
TTTCTATATT CAAGTATTAA AGTACCTTTA TATAACCTTT TAAATAAGAT GAAAAGAGTA
TCTGAGGGGG ATTTAAAGGT TTTAGTAAAT GATACTTATG AAGATGAGAT TGGTGTTATT
TCTGATAATT TTGATTCTAT GTTAAAAAGA GTAAATGAAT TAATTGAAAA GACTAAATTA
CAAGAAGTTG AGAAAAGGGA TTTAGAGATA AGGATGTTAC AGGCACAAAT TAATCCTCAT
TTTCTCTTTA ATACATTGAA CTCTTTAAAG TGGACAGCCT TAATGAATCA AGATTATACA
GTAAGCGAGG GGCTTAGTTC CCTAGCAGAA TTATTAAGAA ATACAATTAT AGATAAAAAT
GAACTTGTAA CTATTAGAGA AGAACTAGAG AATATAAAAA ATTACGTTGT TATTCAAAAG
ATAAGATACG GTAATTCCTT TGATGTTCAG TATGAAGTAG ATGAACTTTT ATTAGAAAAT
AAAGTTATAA AGTTTATCTT ACAACCAATA GTAGAAAATT CAATAATTCA TGGAATTGAT
GAAAATAAGG AGAATCAAAA GATTATTATT AAAATTATGT CAGAGGAAGA AAATATTTTA
ATATCGATTA AGGATAACGG AAAGGGGTTT AATAGTAAAG AAAAGGTTAA AGATAATAAA
CTTTCAGGTA TTGGATGGAA TAATGTTGAT GAGAGAATAA AGTTAACATT TGGCTTAGGT
TATGGGACAA CTATTTACAG TGAGGTGAAT AAAGGAACTA TTGTTAAAAT AGTAATTCCT
AAGAGTATAT AG
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| Protein sequence | MRKIIKKITN TLRGISNFLR KTSIKNRLIA SFSVGIIFCS SILGILLYKK ATNALKNNAI
NYSENMLSIM SEDIYKNKEF LERASIELSM NEEIANNLIN YKFMDGKEKN GFLKYMNDYL
SKKLSLLPNL AEVEIISKDY EVTYMQGFKY FKREDIERYA DESENGLFWF STILNNEPHI
CIVTPVKQDN SIVGYVFMAI KSEVFASSFS LFNIGKGSEI FIIDDKNNII ISENNLNSNF
ILEETDLNKF LKDKGAKDTA RSIVVNGENY VATYRKLKGF NWYIASMTPY DFINADIQSL
RKEMTIIGLL FTLVVLIFSY FLYSSIKVPL YNLLNKMKRV SEGDLKVLVN DTYEDEIGVI
SDNFDSMLKR VNELIEKTKL QEVEKRDLEI RMLQAQINPH FLFNTLNSLK WTALMNQDYT
VSEGLSSLAE LLRNTIIDKN ELVTIREELE NIKNYVVIQK IRYGNSFDVQ YEVDELLLEN
KVIKFILQPI VENSIIHGID ENKENQKIII KIMSEEENIL ISIKDNGKGF NSKEKVKDNK
LSGIGWNNVD ERIKLTFGLG YGTTIYSEVN KGTIVKIVIP KSI
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