Gene CPF_0547 details

Gene Information

• Locus tag: CPF_0547
• Symbol: ribE
• ID: 4203629
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 653070
• End bp: 653723
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638081429
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_695001
• Protein GI: 110799364
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTG GTATTGTAGA AGAAATAGGA GAAGTTATAA GCATAGATAA AAATGAAAAA 
TCATCTTTAC TGAAAATAAG AGCTAATAAG GTCTTAGAGG ATACAAAGAT AGGTGATAGT 
ATATCAACAA ATGGAGTTTG CTTAACTATA ACAACTAAGG GAAAAGATTA TTTTACTGCA 
TATGTTATGG GAGAAACCTT AAGAAAAAGT AATCTTGGAA ACTTAAAAAA ATCAAGTAAG 
GTGAACTTAG AAAGAGCCAT GAGTATTAAT GGCAGATTTA ATGGACATAT AGTAACTGGC 
CATATTGATT CCACTGGAGA AATAATTTCT TTTAAAGATG AGGGGGAAGC AATATGGGTA 
GAAATTAAAG TTTCATATGA ATTAAGCAAA TATATAGTTT ATAAAGGTTC TATAGCTATT 
GATGGAATAA GTTTAACTAT TGCAGAGGTT AAAGGGGAAA GTTTTAAAGT TTCAGTAATT 
CCTCATAGCC AGGAAGAGAC AACATTAACT AAAAGAAAAA TTGGTGATTT AGTAAATATA 
GAATGTGACT CTATTGGTAA GTATGTTGAA AAGCTTTTAG GATTTAAAAA AGATAGTAGA 
AAGAAAAAGT CTGTTTTAAC AGAAGAGTTT TTAACTATTA ATGGGTTTAT TTAA 

 

Protein sequence

MFTGIVEEIG EVISIDKNEK SSLLKIRANK VLEDTKIGDS ISTNGVCLTI TTKGKDYFTA 
YVMGETLRKS NLGNLKKSSK VNLERAMSIN GRFNGHIVTG HIDSTGEIIS FKDEGEAIWV 
EIKVSYELSK YIVYKGSIAI DGISLTIAEV KGESFKVSVI PHSQEETTLT KRKIGDLVNI 
ECDSIGKYVE KLLGFKKDSR KKKSVLTEEF LTINGFI