| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0534 |
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| Symbol | |
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| ID | 4203726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 633592 |
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| End bp | 636261 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638081416 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_694988 |
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| Protein GI | 110799828 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.541541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCTA TAATTTTTAT GATAAATAAA TCAATTAAAA TAAAAGGTAT GAGTTGTGCC
GCTTGTGCTG CTAGAATCGA AAAAGTTCTA GGTAAAATGG ATGGCATATC AAAAGCTAAT
GTTAATTTGG CAACTGAAAA ATTAAATTTA GAGTTTGATG AAAATAAAAT ATCCTTCAAA
GAAATAGAAG AAAAAATAAA TAAGCTAGGT TTCTCAGTAG TTAGAAACTT AAAGAAAGAA
TCTTTCAAAG TTTCTGGAAT GAGTTGTGCT TCCTGCGCAT CTAGAATTGA GAAAGTTTTA
AATAAATTAT CTGGAATATA TAATGCTACT GTTAACTTTG CTAATGAAAG CCTTCAAGTT
GAATATGATG AAGATGAAAT TTCCTTAAAA GAAATTAAAG AAAAAGTAAA GAAACTAGGC
TTTGAACTAA AAGGAAATAA TAAGTCTACT TCCTTTAAGG TAGAAGGAAT GACTTGTTCA
GCCTGTGCAG CTAGAATTGA AAAGGTAACA AGTAAAATGG ATGGTGTTGA AAGTTCTAAT
GTTAACTTCG CAAATTCTAC TCTTAATATT TCTTTCGATA AAGATAAAGT TTCTGCTAAT
GATATAAAAG CAAAGGTAGA AAAATTAGGA TATAAACTTT TAGATGCATC TCAAGAAGAT
GAACATGAAA AAGCAAAAGA GAATGAAACT AAAAGAATGA AAAATAGACT TATTGGCTCA
GCAATATTCA CAATTCCATT ATTCATAATA TCAATGGGAC ATATGGTTGG CCTTCATTTA
CCTAATATAA TAGATCCGAT GCATAATCCC TTAAACTTTG CACTTATTCA ATTACTTCTT
ACAACTGTGG TTATATTCAT ATGTAGAGAT TTCTTTATAC ATGGTTTTAA GAATTTATTT
ATGAGAAGTC CTAATATGGA TTCCTTAATA GCTATAGGAG CTGGTGCTGC ATATGTTTAT
GGATTATTTG CAATATACCA CATTTATATG GACGATAGTA ACTATGCTAT GCAGTTATAT
TTTGAATCTG CTGGAACAAT ACTTACATTA ATAAGTTTAG GTAAATACTT AGAAACTTTA
ACTAAAGGTA AAACTTCTGA TGCAATAAAA AAACTTATGG GATTAGCCCC TAAAACAGCC
ACTCTACTTG TAGATGGAAA AGAAAAAATT GTATCTATTG ATGAAGTTAA AGTTTTTGAT
TTAGTACTTG TTAAGCCAGG TGAGAAATTG CCTGTAGACG GTAAAGTTGT AGAAGGATAT
ACATCAATTG ATGAAAGTAT GCTAACTGGA GAAAGTATTC CTGCTGAAAA AAAAGTAGGA
GATACAGTCT TTGGAGCTAG TATAAATAAA AATGGAAGAA TAATTTATGA AGCTACAAAG
GTTGGTAAGG ATACTGTAAT CTCTCAAATA GTTAAATTAG TAGAAGATGC CCAAGGATCA
AAAGCTCCAA TTGCCAAATT AGCTGATACT ATTTCAGGTT ATTTTGTACC TATAGTAATA
TCTTTAGCAG TAATTGCAAG TTTAGCTTGG TATTTCTCTG GTGAAAGTAA AACTTTTGCA
CTTACAATCT TTATATCTGT ATTAGTAATT GCTTGTCCAT GCGCTTTAGG TTTAGCTACC
CCAACAGCTA TTATGGTTGG TACAGGTAAG GGAGCTGAAA ATGGAATACT TATTAAAAGT
GGTGAAGCTT TAGAAAGCAC ACAAAACTTA AATACTGTTG TCTTCGACAA AACAGGAACT
ATAACTGAAG GAAAACCTAG GGTTACAGAT ATTATTTGTG AAAATATTTC AAAAGATGAA
CTCCTTTTAT TAGCAGCCTC AGCAGAAAAA GGTTCAGAAC ATCCTCTTGG AGAAGCTATT
GTTAGAGATG CTGAAGAAAA AAATATCAAA CTAAAAAATG TTTTAGATTT TGAAGCAATA
CCTGGTAAGG GAATTAAGTG CTCTATTGAA AATAAATCAA TTTTATTAGG TAACTATAAA
CTTATGAAAG ATAAAAATAT AAATCTTAAA AATTTATTAG AGACTTCTGA AGAACTAGCT
TCAAAGGGAA AAACTCCTAT GTTTATTGCT ATTAATGAAA AAATAGCTGG TATAATCGCC
GTTGCTGATA CTGTTAAAGA AACAAGTAAA AAAGCTATAG AAACCCTACA AAAAATGGGA
CTTGAAGTAG TAATGTTAAC AGGAGATAAT TTAAAAACAG CTAAGGCTAT TGCAAAAGAA
GTAGGTGTAG ATAGAGTTAT CGCTGAGGTT CTTCCTCAAG AAAAGGCTGA AAAAATTAAA
ACCATTCAAG ATGAAGGCAA AAAAGTCGCT ATGGTTGGTG ATGGAATAAA TGATGCTCCT
GCTTTAGCTA TTTCTGACAT TGGAATGGCT ATAGGTTCAG GTACTGATAT AGCTATGGAG
TCTGCTGATA TAGTTCTAAT GAAAGGTGAT ATATTACATG TTGTTGGTGC TATTCAATTA
AGCAGGCAAA CAATGAAAAA TATAAAGGAA AACTTATTCT GGGCCTTTGG ATACAATACT
TTAGGTATTC CAGTAGCAAT GGGAGTTCTT CATATATTTG GAGGCCCATT ACTTAATCCA
ATGATAGGTG CCTTTGCCAT GAGCTTTAGT TCAGTATCAG TATTATTAAA TGCCTTAAGA
CTAAAAAAAT TCAAACCAAA CTATAAATAA
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| Protein sequence | MSAIIFMINK SIKIKGMSCA ACAARIEKVL GKMDGISKAN VNLATEKLNL EFDENKISFK
EIEEKINKLG FSVVRNLKKE SFKVSGMSCA SCASRIEKVL NKLSGIYNAT VNFANESLQV
EYDEDEISLK EIKEKVKKLG FELKGNNKST SFKVEGMTCS ACAARIEKVT SKMDGVESSN
VNFANSTLNI SFDKDKVSAN DIKAKVEKLG YKLLDASQED EHEKAKENET KRMKNRLIGS
AIFTIPLFII SMGHMVGLHL PNIIDPMHNP LNFALIQLLL TTVVIFICRD FFIHGFKNLF
MRSPNMDSLI AIGAGAAYVY GLFAIYHIYM DDSNYAMQLY FESAGTILTL ISLGKYLETL
TKGKTSDAIK KLMGLAPKTA TLLVDGKEKI VSIDEVKVFD LVLVKPGEKL PVDGKVVEGY
TSIDESMLTG ESIPAEKKVG DTVFGASINK NGRIIYEATK VGKDTVISQI VKLVEDAQGS
KAPIAKLADT ISGYFVPIVI SLAVIASLAW YFSGESKTFA LTIFISVLVI ACPCALGLAT
PTAIMVGTGK GAENGILIKS GEALESTQNL NTVVFDKTGT ITEGKPRVTD IICENISKDE
LLLLAASAEK GSEHPLGEAI VRDAEEKNIK LKNVLDFEAI PGKGIKCSIE NKSILLGNYK
LMKDKNINLK NLLETSEELA SKGKTPMFIA INEKIAGIIA VADTVKETSK KAIETLQKMG
LEVVMLTGDN LKTAKAIAKE VGVDRVIAEV LPQEKAEKIK TIQDEGKKVA MVGDGINDAP
ALAISDIGMA IGSGTDIAME SADIVLMKGD ILHVVGAIQL SRQTMKNIKE NLFWAFGYNT
LGIPVAMGVL HIFGGPLLNP MIGAFAMSFS SVSVLLNALR LKKFKPNYK
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