| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0530 |
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| Symbol | speB |
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| ID | 4201386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 627528 |
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| End bp | 628385 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638081412 |
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| Product | agmatinase |
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| Protein accession | YP_694984 |
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| Protein GI | 110798973 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGATGA ATAGAAATGT AAGCACTTTT ATAGGGTGTG AAGCTGAATA TGATGAATCA
AGCATAGTTG TATTTGGAGC TCCTTTTGAT TCAACAACTT CTTTTAGACC AGGTACTAGG
TTTGCAAGCC AAGTGATGAG AGGAGAATCT TGGGGATTAG AAAGCTATAG TCCATATCAA
GATTTAGATC TTTATGATTT TAATATTTTC GATGGAGGAG AAATAGAGCT TCCTTTCGGA
AATTCAGAGG GAGCATTAGC TTTAATAGAG GATTTTTCAA CTAAGGTTGT TGAAGATGGG
AAAATACCAG CTATGATAGG TGGAGAGCAT TTAGTAACTT TAGGGGCATT TAAAGGAGTA
TTTAAAAAAT ATCCTGATGT TCATGTAATT CACTTTGATG CTCATGCAGA TTTAAGAGAA
GATTATTTAG GTCAAAAACT ATCTCATGCT ACTGTTATAC ATAGAGTTTG GGATTTAGTA
GGAGATAATA AAATATTCCA ATTTGGAATA CGTTCTGGTG AAAAAGAAGA ATTTTTATGG
GCAAAGGATC ACGTTTATAC AAATAAGTTT AATTGTGATA CTTTAGATTA TGCCTTAGAA
ATGGTTAAAG ATAAACCTGT TTATGTAACA ATAGACTTAG ATGTTTTAGA CCCATCTGTA
TTCCCAGGTA CAGGAACACC AGAACCAGGT GGAATTCAGT TTAATGAGCT TCTAAATTCA
ATATTAAAAC TTAGAGGGTT AAATATTGTG GGATTTGATA TTAATGAATT ATCACCACAG
TATGACCAAA CAGGAGCATC AACGGCTGTG GCTTGTAAAG TTTTAAGAGA GATGTTATTA
GTAGCAAATA ACAAATAA
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| Protein sequence | MLMNRNVSTF IGCEAEYDES SIVVFGAPFD STTSFRPGTR FASQVMRGES WGLESYSPYQ
DLDLYDFNIF DGGEIELPFG NSEGALALIE DFSTKVVEDG KIPAMIGGEH LVTLGAFKGV
FKKYPDVHVI HFDAHADLRE DYLGQKLSHA TVIHRVWDLV GDNKIFQFGI RSGEKEEFLW
AKDHVYTNKF NCDTLDYALE MVKDKPVYVT IDLDVLDPSV FPGTGTPEPG GIQFNELLNS
ILKLRGLNIV GFDINELSPQ YDQTGASTAV ACKVLREMLL VANNK
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