| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0523 |
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| Symbol | |
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| ID | 4201912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 620264 |
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| End bp | 621655 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638081405 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_694977 |
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| Protein GI | 110801311 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0562889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGG CAATTAAATC TACTGATTTT GAGGTAGAAA AAGGCAATGG ACGATTAAAG
CATCCAGCAG GACTATACCT TTTATTCTTC ACAGAAATGT GGGAAAGATT TAGTTACTAT
GGAATGAGAG CTTTATTAAT GCTTTACTTA ACAGCATCAT TTGTGACTGG CGGATTAGGA
TATGATGTAC CTAGTGCAGC TAGAATATAT GGAGCTTATA CTTTTTTAGT TTACTTTACA
CCAATAATTG GTGGAGAAAT AGCAGATAAG TTTTTAGGAC AGAAAAAATC AATTATGCTT
GGGGCAGCAG TAATGATTTT AGGTAACTTA ACTTTATTTG GATGGCAAAC TAGATGGGCT
TTATACTTAG GATTAGGGTT CATAATAGTA GGAAATGCTT TCTTTAAACC AAATATATCA
ACAATAGTTG GTCAATTATA TGAAGATGGT GACAAGAGAA AAGATTCAGC TTTCACAATA
TTCTACATGG GAATAAACTT AGGATCTTTA ATAGCACCAA TAATATGTGG ATTATTAGCA
GAAAACTTTT TTGCTACAAA ATCAGGAGAA GTAATACTTC ACTATGGATT TAGATACGGA
TTCTTAGCAG CAGGTATAGG TATAATATTA GGAGAAATTA TCTTTATAAC TTTATCTCCA
AAATACTTAG CACATGTTGG TGAAATTAAA AGAGAAAAAA ATAAAAAAGA TGTTGCAAAA
GAAAAGAAAC CTTTAACTAA GCAAGAGAAG AAGAGAGTTG CAGTTATATT AATACTTGCA
TCATTCGTTG TATTCTTCTG GGCAGGATTT GAACAAGCAG GTACAACTTT AACATTATTT
GCTGAAAATG CAACTAATAG AAGTTTATTT GGATGGACAG TACCAGTAGC ATTCTTCCAA
TCTATAAACC CATTATTTAT ACTAATATTA GCACCATTAT TCTCAAAATT ATGGTTTACA
CTTGCTAACA GTAAAAGAGG GGATTTATCA ATCCCAACTA AAATGGCTAT GGGTATGATA
GTTTTAGGAT GTGGATTCTT ATTAATGGTT TTCGCAACTA TGTCATTAGG TGGAAATGTT
GAAAATCCAG CAGTTAAAGC TAGTATGTTC TGGTTAGTAG GAACTTACTT ATTTAACACA
ATGGGAGAAC TTTGTTTATC ACCAATAGGA CTTTCAATGG TAAGTTCATT AGCACCAGCT
AAATACGCTT CATTATTAAT GGGTGTATGG CTTGCTAGTA ACGGAGTAGC AAACTACTTA
TCAGGATTCA TAGCATCATT TGTTGAAAAA CTAGGAGCTT TAGAACTATT TGGTTCAATA
GCTGGAGTAA GTATAGTATT AGGTTTAGTA CTATTACTAT TAAGCAAAAA GATTACAGCT
ATGATGGAAT AA
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| Protein sequence | MAEAIKSTDF EVEKGNGRLK HPAGLYLLFF TEMWERFSYY GMRALLMLYL TASFVTGGLG
YDVPSAARIY GAYTFLVYFT PIIGGEIADK FLGQKKSIML GAAVMILGNL TLFGWQTRWA
LYLGLGFIIV GNAFFKPNIS TIVGQLYEDG DKRKDSAFTI FYMGINLGSL IAPIICGLLA
ENFFATKSGE VILHYGFRYG FLAAGIGIIL GEIIFITLSP KYLAHVGEIK REKNKKDVAK
EKKPLTKQEK KRVAVILILA SFVVFFWAGF EQAGTTLTLF AENATNRSLF GWTVPVAFFQ
SINPLFILIL APLFSKLWFT LANSKRGDLS IPTKMAMGMI VLGCGFLLMV FATMSLGGNV
ENPAVKASMF WLVGTYLFNT MGELCLSPIG LSMVSSLAPA KYASLLMGVW LASNGVANYL
SGFIASFVEK LGALELFGSI AGVSIVLGLV LLLLSKKITA MME
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