| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0522 |
|---|
| Symbol | |
|---|
| ID | 4202726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 618727 |
|---|
| End bp | 619860 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 638081404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_694976 |
|---|
| Protein GI | 110798580 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.176917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGTTTA AAAATAATAA AATTAAAGAT TATATTTTTT TATCAACATA TATAATACTT
TTAATATTCT TTTTTATAAA TATAAAGGAT ATTATGAACT TTCTTTATAA GTTTTTAGGA
ATACTAAAGC CTTTTATATG GGGAATAGCC ATAGCTTTTA TTCTTAATAT TCCAGTGAAA
TTAATAGAAA AAAACTTAGG AAATGGTAAG TTCTTTAAAG GAATGAAAAG AAGTTTTTCA
ATAACTTTAA CATTTCTTTT CTTTATATTA GCTATAACAT TATTTATATT ATTTGTAATT
CCTCAATTAT TAAGTAGTAT TTCAACTTTA ATGAATAGTA TTCCAGAATA CTTATCTCAA
TTTGAAAAGT TTTTAGAGGT GAATGCAATA AATAATTCAC AGTCACAAGT TATGATGCAA
AATATAATTA ATGAGTTACT AAATATGTGG AAAGAAATAT TAAAGGTAAC AAGTCAAATA
GTAGGAACCT CCTTAGGTTA TTTATTAGAC TTTACCCTAG GAATAACTTA TGGAGTAATA
AATTTCTTTT TATCCTTAAT TTTAGCTATA TATATGCTAG CAAGTAAAGA AATCTTAATA
AGTCAACTAA AACTTATAAT ATATGCTTTT GTTAGTAAAA ATAAGGCAGA TAGAATTATA
GAACTAGGTA ATATGTGTAA TGAAATGTTT TCTAAATTCA TATTAGGGCA GTGCACAGAG
GCACTAGTTA TAGGAGTCTT ATGCTTTATA GGTATGATAA TTTTAAAAAT GCCATATGCC
TTATTAATAA GCGTAGTAAT TGGGGTAACA GCATTAATAC CTGTTTTTGG AGCCTTTTTA
GGTACAATAC CCTCAGCATT TATAATACTA ATAATAGATC CTATTAAGGC TCTTTGGTTT
ATTATATTTA TAATAGTTCT TCAGCAATTA GAAGGAAATC TAATATATCC AAGGGTTGTT
GGAAGTTCTA TAGGACTATC TGCCCTGTGG GTTATGTTTG CTATGATAGT TGGAGGAAGT
TTATTTGGAA TAATAGGAAT GTTAATAGGA ATTCCTATCT TTGGTGTAGT CTTTAAAATC
TTAAAGAGAG TAGCTAATAG GAAGATAAAT GAAAAGGGAA TTGAAAGAAG ATAA
|
|---|
| Protein sequence | MEFKNNKIKD YIFLSTYIIL LIFFFINIKD IMNFLYKFLG ILKPFIWGIA IAFILNIPVK
LIEKNLGNGK FFKGMKRSFS ITLTFLFFIL AITLFILFVI PQLLSSISTL MNSIPEYLSQ
FEKFLEVNAI NNSQSQVMMQ NIINELLNMW KEILKVTSQI VGTSLGYLLD FTLGITYGVI
NFFLSLILAI YMLASKEILI SQLKLIIYAF VSKNKADRII ELGNMCNEMF SKFILGQCTE
ALVIGVLCFI GMIILKMPYA LLISVVIGVT ALIPVFGAFL GTIPSAFIIL IIDPIKALWF
IIFIIVLQQL EGNLIYPRVV GSSIGLSALW VMFAMIVGGS LFGIIGMLIG IPIFGVVFKI
LKRVANRKIN EKGIERR
|
|---|
| |