Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0512 |
Symbol | |
ID | 4201325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 611554 |
End bp | 612222 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081394 |
Product | two-component response regulator |
Protein accession | YP_694966 |
Protein GI | 110798719 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGA AAATACTTAT AGTAGAAGAT GATCCAATGG TGGCTCTTAT TAATAAAAGA TTTTTAGAAA ATATGGGCTT TAAAGATATA TTAGGACCAG TACAAACTGA AGAGGAAATA ATAAAGGTAT TAGATAAAGA AAATATTGAT TTAATTCTTT TAGATGTATA TCTTCCTAAG AAAAATGGTA TTGATATATT AAAAAGTTTA AGATACAAGA AGTATTTAAC TGATGTAATA ATGATAACTG CTGCCAATAG TGTTGAAGAG GTGAAAAGAG CCTTTGCTTA TGGGGTAACT GATTACTTAG TTAAGCCCTT TGAATTTGAG AGGTTTGAGG AGGCTATAAA TAAGTATAAA CAAAAAAATA ATCTTTTAAA TAAGAGAGAG GCTTTAAGTC AGCAGGATAT AGATGTTATT TCAAAATCTT TAGAGGAAAA GATTGAATTA CCTAAGGGAT TAAATCAAAA AACTTTAGAT AGGATAATGG AGTTTTTAAA AGAAAACCAA GGGAAGGTTT GGACACTAAG AGAAATAGCC TATGAGTTAA AAATAAGCAA TGTAACAATA AAAAAATATA TGGATTACTT AGAGGATGTT AAAAAGGTAA ATGTAACACT AACTAGCGGG AATGTTGGGA GACCTGAATA TAAATATACT CTAGGCTAA
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Protein sequence | MGKKILIVED DPMVALINKR FLENMGFKDI LGPVQTEEEI IKVLDKENID LILLDVYLPK KNGIDILKSL RYKKYLTDVI MITAANSVEE VKRAFAYGVT DYLVKPFEFE RFEEAINKYK QKNNLLNKRE ALSQQDIDVI SKSLEEKIEL PKGLNQKTLD RIMEFLKENQ GKVWTLREIA YELKISNVTI KKYMDYLEDV KKVNVTLTSG NVGRPEYKYT LG
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