Gene CPF_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0512 
Symbol 
ID4201325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp611554 
End bp612222 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content29% 
IMG OID638081394 
Producttwo-component response regulator 
Protein accessionYP_694966 
Protein GI110798719 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA AAATACTTAT AGTAGAAGAT GATCCAATGG TGGCTCTTAT TAATAAAAGA 
TTTTTAGAAA ATATGGGCTT TAAAGATATA TTAGGACCAG TACAAACTGA AGAGGAAATA
ATAAAGGTAT TAGATAAAGA AAATATTGAT TTAATTCTTT TAGATGTATA TCTTCCTAAG
AAAAATGGTA TTGATATATT AAAAAGTTTA AGATACAAGA AGTATTTAAC TGATGTAATA
ATGATAACTG CTGCCAATAG TGTTGAAGAG GTGAAAAGAG CCTTTGCTTA TGGGGTAACT
GATTACTTAG TTAAGCCCTT TGAATTTGAG AGGTTTGAGG AGGCTATAAA TAAGTATAAA
CAAAAAAATA ATCTTTTAAA TAAGAGAGAG GCTTTAAGTC AGCAGGATAT AGATGTTATT
TCAAAATCTT TAGAGGAAAA GATTGAATTA CCTAAGGGAT TAAATCAAAA AACTTTAGAT
AGGATAATGG AGTTTTTAAA AGAAAACCAA GGGAAGGTTT GGACACTAAG AGAAATAGCC
TATGAGTTAA AAATAAGCAA TGTAACAATA AAAAAATATA TGGATTACTT AGAGGATGTT
AAAAAGGTAA ATGTAACACT AACTAGCGGG AATGTTGGGA GACCTGAATA TAAATATACT
CTAGGCTAA
 
Protein sequence
MGKKILIVED DPMVALINKR FLENMGFKDI LGPVQTEEEI IKVLDKENID LILLDVYLPK 
KNGIDILKSL RYKKYLTDVI MITAANSVEE VKRAFAYGVT DYLVKPFEFE RFEEAINKYK
QKNNLLNKRE ALSQQDIDVI SKSLEEKIEL PKGLNQKTLD RIMEFLKENQ GKVWTLREIA
YELKISNVTI KKYMDYLEDV KKVNVTLTSG NVGRPEYKYT LG