Gene CPF_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0505 
Symbol 
ID4202076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp600784 
End bp601230 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content27% 
IMG OID638081387 
ProductMarR family transcriptional regulator 
Protein accessionYP_694959 
Protein GI110799252 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCC TAGAAAATTT AATGGGAGCT ACAGAAGAAC TTTACACATT ATTATTGTGT 
TTAAATAGAA AAGTATTTAG TCATGATGAT ATTATTAAAA GATTGTCTAT TCCTCCATCA
CATGCCAAAG TTATATTTCA TTTACATTGT GGTGGGGAAG CTTCTGTTTC AGAAATAGCC
AAAAATTTAT CTATATCAAA ATCAAATATG ACTCCAATTA TAGATAAACT TATTCAAGAA
AATTTAGTTG AAAGATTTAC AGATCCTAAT GATAGAAGAA TCATCAGAGT TAGAGTAACG
GAAAAAGGGC ATGAATTTTG TTTAAAACAA AGAGAAAAAA CTAAAAAGCA TCTTGAAGAA
AAAATATCAT CCCTTTCACC AGAGGAATTA GAAAGAATTA AAGATTTAGC CAAAGAACTT
AATAGCATTT TTTCTAAAAT AGAATAA
 
Protein sequence
MNTLENLMGA TEELYTLLLC LNRKVFSHDD IIKRLSIPPS HAKVIFHLHC GGEASVSEIA 
KNLSISKSNM TPIIDKLIQE NLVERFTDPN DRRIIRVRVT EKGHEFCLKQ REKTKKHLEE
KISSLSPEEL ERIKDLAKEL NSIFSKIE