Gene CPF_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0503 
SymbolulaA 
ID4203889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp598227 
End bp599498 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content29% 
IMG OID638081385 
ProductPTS system ascorbate-specific transporter subunit IIC 
Protein accessionYP_694957 
Protein GI110800122 
COG category[S] Function unknown 
COG ID[COG3037] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA TATTAGATTT TTGTGTAAGT TTTTTTAGAA ATCCAGCTTT ATTTATGGGG 
CTTGTAGTAG CAATTGGTTT AATACTTCAA AGAAAACCAA TAGATGCTAT TTTAAAAGGC
ATATTTAAAG GAATAATAGG AATGGTAATT CTACTTAAGG GAGTAGATAT AGTAGTTTCT
TCAATTACTC CTTTAGCTAA TGCCTTTTCA GGATTATTTA ACACTCAAAG TAATAGTACA
TTAGGAGATT TTAATGTATT TTTAGGTCAG TATGGAAGCT ATGTTGGATT AATACTTCTT
TGCGGATTTG TAATCAACAT AATTATTGCT AGATATACAA GATTTAAGAC TATATACTTA
ACAGGAAATA TATTATTTTG GTATCCAATG CTTTTCTTAG CTGTTGGTAT TGAAAATAAT
GTAAGTGGAT TAAAGTTATT CATATTCACA TTAATTATGT ATATTTTAGT TATAACAATA
TTCCCATATA TACTAAGAAA ACATGTTAAG TATGTAACTG GAAATGATAG TTTTACTATT
GGACATACTG CCTCAATATA TTGTTTATTA GGTTCTTATA TAGGAAAACT TGTTGGACAA
AAAGATAAAA ATATAGAAAA TTTAAATCTT CCAAAGTCTT TAAGTTTCTT TAGAGATACA
AATATAACAG CGGCAATAGT TATGTTTATA GTTTATATAA TAGTTGGTTT ATTTATAGGA
AAAGAAAGTA GAATAGCTAT ATATGGAAGT GAGCCACTTA TTACTTATTC TTTAATTCAA
GGAATAACTT TTGCAGCAGG TATGATAATA CTTTTAACAG GGGTAAGAAT GATTTTAGGA
GAAATAATAC CATCATTTAA AGGTATAGCA GATAAATTAG CGAAGGGTTC AATTCCAGCT
TTAGATATTC CTATGATATT CCCATATGGA CCAAATGCTT TATTAATTGG ATTCATAATA
GCACTTATAA CAAGTATAGG TACTTTATTC TTATTAGGAG CATCAGGAGT ATTAACCTTT
GCTCTTATAC CACTAGTAGT TGCATGTTAT TTTGATGTTG CCCCAGGAGC TATTTTTGCC
AATGCAAGAG GTGGATGGCC AGCAGCTATA ATTACAAGTG CTTTAGGAGG AATAATCCTA
ATGGTATTAG CGGCTATTTC CTTAAATTTA GTAAGTGGAA CTGTAGGAAA CTTCATTCAA
ACATATGGAG GAAACGAATT CTCAATATGG GTAATAATAA GTGACTTAGT AGGAAAGATT
TTTAGCATAT AA
 
Protein sequence
MKEILDFCVS FFRNPALFMG LVVAIGLILQ RKPIDAILKG IFKGIIGMVI LLKGVDIVVS 
SITPLANAFS GLFNTQSNST LGDFNVFLGQ YGSYVGLILL CGFVINIIIA RYTRFKTIYL
TGNILFWYPM LFLAVGIENN VSGLKLFIFT LIMYILVITI FPYILRKHVK YVTGNDSFTI
GHTASIYCLL GSYIGKLVGQ KDKNIENLNL PKSLSFFRDT NITAAIVMFI VYIIVGLFIG
KESRIAIYGS EPLITYSLIQ GITFAAGMII LLTGVRMILG EIIPSFKGIA DKLAKGSIPA
LDIPMIFPYG PNALLIGFII ALITSIGTLF LLGASGVLTF ALIPLVVACY FDVAPGAIFA
NARGGWPAAI ITSALGGIIL MVLAAISLNL VSGTVGNFIQ TYGGNEFSIW VIISDLVGKI
FSI