Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0480 |
Symbol | rfbC |
ID | 4202979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 569550 |
End bp | 570119 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081362 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_694935 |
Protein GI | 110800202 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACT TTAAATTTAT AGAAACAAAA ATAAAAGATT TATATATTAT AGAACCAAAA GTTTTTGGAG ATGAAAGAGG ATATTTCATG GAAACATATA GTCAAAAAGC TTTTGAAGAA GCTGGACTTA CTATGAAATT TGTTCAAGAT AATGAATCAA AATCTAAAAA AGGTGTTTTA AGAGGATTAC ATTTCCAAAC TAAACATACT CAAGGAAAGC TTGTTAGAGT AACTCAAGGA GAGGTTTGGG ATGTAGCTGT AGATTTAAGA AAAGGATCAC CTACATTTGG ACAATGGGAA GGTGTTCATT TAAGTGCAGA AAATAAAAGA CAATTCTACG TTCCAGAAGG ATTTGCTCAT GGATTTGTAG TTTTATCTGA TGAAGCTGTA TTTAACTATA AATGTACAGA TTTTTATGCT CCAGAATATG ACAGTGGACT TCTTTGGAAT GATAAATATG TTAATGTAGA ATGGCCTTTA GAAGGAATAG AAGAAATAAT CTTATCAGAA AAAGATAAGA AACAAAAAAC TTTAAAAGAA TTAGATATTC CTTTTATATA TGAAGGTTAA
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Protein sequence | MSNFKFIETK IKDLYIIEPK VFGDERGYFM ETYSQKAFEE AGLTMKFVQD NESKSKKGVL RGLHFQTKHT QGKLVRVTQG EVWDVAVDLR KGSPTFGQWE GVHLSAENKR QFYVPEGFAH GFVVLSDEAV FNYKCTDFYA PEYDSGLLWN DKYVNVEWPL EGIEEIILSE KDKKQKTLKE LDIPFIYEG
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