Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0474 |
Symbol | |
ID | 4202180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 562178 |
End bp | 563644 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 19% |
IMG OID | 638081356 |
Product | putative polysaccharide transporter protein |
Protein accession | YP_694929 |
Protein GI | 110798949 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000432304 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAAAA AGGTTAAAAA TGCAGCATTT ATATATGCTT TCGGACAAAT TTTATCAAAA TCTATAAATT TTATATTTAT ACCACTCTAT ACAAACAAAT TAGGAACTTA TGGATATGGT CAATTAGCTT TAATAGATAT GCTTTTTAGT TTAATAAGTG TATTTATTAT TTTAGGAATA AATTCTGGAT ATATAAGATT CTATAAAACA TATAATGAAT TAGAAAAAAA AAGATTGATG AATACTACAT TAACTTTTTC AATTATATTT TCAATTGTTT TTATAATAGT AAACATGATT ATATCACAAT TTTATATAAA TAAAATACTT TCTTTGGAAA ATTTAAACTT AATTTTTTTC TTGCTTTTGA TAAGATGTGC TACAGAACAA ATTATATATT TAATGATATT AGAATACTCA ATGAATTATG AAGCTAAAAT TGTTGTTAAG TTAGAATGTT TTAAGCTAAT ACTGAACTTA ACATTAATAG TATACTTTGT AGCAATAGTT AATCAAGGTA TTTTAGGAAT GTATAAAGGA TATGTAATAA GTAATTGTAT TATATTAGCA TTTTTAATAT TTAAGAATAT TAATAAATTT AAATTAGAAA TTGATTTTAA AATGTTAAAG AATATGTTGA AGTATAGTAT ACAATTAATA CCTTCAGGAA TTTCCGCAAT TGTATTAAAT TTAGCTGATA GATATATTTT AGAATTTTTT TCAGGTTTAT CTATAACAGG AATATATTCG TTAGGGTATA AATTTGGGAC ACTTATAGAT CCTTTATTTA TATTACCATT TAAAAAGGTA TTTACTCCTT TTAAATTTGA AATATATAGA GATAATGATG CTAATGAAAA ATTAAATGAA TGGTATTATA AATATAATAT TATTGGAATA GCAGTTGTGT TCATGATTTC TATATTAGGA AAATTAATAA TAATTATAAC TTCACCAGTA GAATTTATAA ATGCTTATAA AATAATACCG TTAATACTTA TTTCATATTT TATTTATGGA AAAAGTGAAT TTTATAGTTT AGGAATTTAC ATAAGCAATA AAACTAGATT TGATTGTTAT ATAATGATTT TATCAGGAAT TATTAATATA ATTTTAAATT TTATTTTAAT ACCATTTGCA GGAATGTATG GGGCAACTAT AGCAACAATA ATATCATATT ATTTATCTAA TATTTTATTT AAAATAGTCT CTAAAAGATG TTGTGAATTT AGATATAATC TTAATAAAAA TATAGTAAAG TTTTATGTAA TAAGCATTAT ATTATATTTA AGTTATTTTA TATTAACATA TAACAATACT AATTTATTAA TGGAATTATT ATTATGTATT TTTATAATTT TAATTTGGGC AATTATAACT AATTATTTAA AAATAATAGA TAAAAAAGTT TATTATAAAA TAATTTATTT AATAAAGAAG AAGGTGCTAA AGAATGAAAA TATGTAA
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Protein sequence | MGKKVKNAAF IYAFGQILSK SINFIFIPLY TNKLGTYGYG QLALIDMLFS LISVFIILGI NSGYIRFYKT YNELEKKRLM NTTLTFSIIF SIVFIIVNMI ISQFYINKIL SLENLNLIFF LLLIRCATEQ IIYLMILEYS MNYEAKIVVK LECFKLILNL TLIVYFVAIV NQGILGMYKG YVISNCIILA FLIFKNINKF KLEIDFKMLK NMLKYSIQLI PSGISAIVLN LADRYILEFF SGLSITGIYS LGYKFGTLID PLFILPFKKV FTPFKFEIYR DNDANEKLNE WYYKYNIIGI AVVFMISILG KLIIIITSPV EFINAYKIIP LILISYFIYG KSEFYSLGIY ISNKTRFDCY IMILSGIINI ILNFILIPFA GMYGATIATI ISYYLSNILF KIVSKRCCEF RYNLNKNIVK FYVISIILYL SYFILTYNNT NLLMELLLCI FIILIWAIIT NYLKIIDKKV YYKIIYLIKK KVLKNENM
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