Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0468 |
Symbol | |
ID | 4203156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 554774 |
End bp | 556003 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081351 |
Product | UDP-glucose/GDP-mannose dehydrogenase family protein |
Protein accession | YP_694924 |
Protein GI | 110799320 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0698877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT TAAATATTAT TGGATTAGGA TATATAGGTT TGCCAACAGC ATTATCATTT GCAAGTGCAG GAATTGAAGT CATAGGAACA GATTATAACA AAGAAATAGT TAATACATTA AATAATGGAC GAGTTACTTT TAAAGAAGAT GGGCTGTATA ACTTATACAA GAAGGCTTTA AATAAAGGAA TAGAGTTTTC AACTGAGTAT GCTAAAACTA ACAAATACAT AATAACTGTA CCTACACCAT ATATAAAAGA AAGCAAAAAA TTAGATGCTA GGTATGTTAT TTCTGCAGTA GAAAGTGTAT TAGAAGTTTG TGATAAAGGG ACAATTCTTG TAATAGAATC AACAGTTTCT CCAGGTACTA TGGATAAGTT TGTAAGGCCA ATAGTTGAAA ATAGAGGGTT TGTAATTGGA GAGGATATAC ATTTAGTACA TGCTCCAGAA AGGATAATAC CAGGAAATAT GGTTAATGAG TTGAAAAATA ACTCAAGAAC TATAGGTTCT GATAATATTG AAATAGGTTA TGAAGTTAAA AGATGGTATG AAACTTTCTG TAAGGGTGAG ATAGTTGTTA CAGATATTAA AACAGCTGAA CTTTCAAAAG TTGTTGAAAA TACATTTAGA GATATAAATA TAGCTTTTGC AAATGAGCTT TCAAGAATAT GTAGAAAAGA GAATATGGAT GTTTATGAAT TAATAAATAT AGCTAATAAA CATCCTAGAG TTAATATACT TACTCCAGGT CCAGGAGTTG GAGGACATTG TATATCAGTA GATCCGTGGT TTTTAGTGGG GGATTATCCT GAAATAGTAA ATATAATTAA GGCTGCTAGA GAGGTTAATG ATTCACAACC GGATTTTGTT ATAGATAGAA TAAGGGATAT CATGAATGAA AATGGAATAA CTGATATATC AAAAGTTGGT TTATATGGGC TTACATATAA AGAAAATGTT GATGACTTAA GAGAAAGTCC AACACTTCAA ATATTAGAAA AATTAGAACG ATATTTTGTA AAAGGAATAA AACTATATGA TCCTTGGATA GAAGAAAAAA TATTTGAAAA TCAATATAAT AATTTTAATG AGTTTTTAGA TAATATTGAA TTGGTAGTAG TTCTTGTAGC ACATGATCAT ATAAAAGAAT TTAAAGACAT GCTTGAGGGA AAGTTAATTT TTGATACTAA AAATATATTG AGAAATTTAA ATGGAATATA TAAGTTATAG
|
Protein sequence | MKKLNIIGLG YIGLPTALSF ASAGIEVIGT DYNKEIVNTL NNGRVTFKED GLYNLYKKAL NKGIEFSTEY AKTNKYIITV PTPYIKESKK LDARYVISAV ESVLEVCDKG TILVIESTVS PGTMDKFVRP IVENRGFVIG EDIHLVHAPE RIIPGNMVNE LKNNSRTIGS DNIEIGYEVK RWYETFCKGE IVVTDIKTAE LSKVVENTFR DINIAFANEL SRICRKENMD VYELINIANK HPRVNILTPG PGVGGHCISV DPWFLVGDYP EIVNIIKAAR EVNDSQPDFV IDRIRDIMNE NGITDISKVG LYGLTYKENV DDLRESPTLQ ILEKLERYFV KGIKLYDPWI EEKIFENQYN NFNEFLDNIE LVVVLVAHDH IKEFKDMLEG KLIFDTKNIL RNLNGIYKL
|
| |