| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0466 |
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| Symbol | |
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| ID | 4201947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 553078 |
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| End bp | 553746 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638081350 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | YP_694923 |
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| Protein GI | 110801035 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000106234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATGAAT CTATGGAGAA GGTTCAAGAA GAAAAAGAAT ATATAAAAGC AGACCAAGGA
AATAGAATAT ACTTGTTTTT TAAGAGATTA ATAGATATCC TTGGAGCTAG CTTTGGATTA
ATCATATTAA GTCCAGTATT TTTAATTGTA GCAATAGCTA TAAAAATTGA AGATAGCAAG
GGTAGCGTAC TATTTTCACA AAAAAGAGTT GGACAGTATG GTAAAGAATT TAATATGTAC
AAATTTAGAT CCATGGTTAG TAATGCAGAA GAGCTTAAAG CTAAGCTTAT GGAAAAAAAC
GAAATGTCAG GACCTATGTT TAAAATGAAA CATGATCCTA GAATAACTAA GGTTGGAAAG
TTTATAAGAA AGACTAGTAT AGATGAACTT CCTCAGCTTA TAAATATTCT TAAGGGTGAA
ATGAGCTTAG TTGGTCCTAG ACCAAGCCTT CCAAAGGAAG TAGCTAAATT TGAACCCTGG
ATGTTAGAAA GGCTAGAAGT GAAGCCGGGA TTAACATGTT ATTGGCAAGT TATGGGGAGA
AATGATATAG ATTTTGAAGA TTGGATGAAG CTGGATATAA AGTATGTCCA TGATAGAAAT
TTTTGGCTAG ATATAAAGTT AATTTTTAAA ACGTTTTTTG TGCTTTTTGG AGATGAAAGT
GCGAGTTAA
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| Protein sequence | MYESMEKVQE EKEYIKADQG NRIYLFFKRL IDILGASFGL IILSPVFLIV AIAIKIEDSK
GSVLFSQKRV GQYGKEFNMY KFRSMVSNAE ELKAKLMEKN EMSGPMFKMK HDPRITKVGK
FIRKTSIDEL PQLINILKGE MSLVGPRPSL PKEVAKFEPW MLERLEVKPG LTCYWQVMGR
NDIDFEDWMK LDIKYVHDRN FWLDIKLIFK TFFVLFGDES AS
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