Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0464 |
Symbol | |
ID | 4203910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 551513 |
End bp | 552211 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081348 |
Product | capsule chain length determinant protein |
Protein accession | YP_694921 |
Protein GI | 110799894 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000492666 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA ATACTATAAG CTTACAAGAA ATTGCTTATG CTTTAAAGAA GAGATGGAAA CTAATTGCAC TAATAACTAT AGCTGCTACC TTAGTTTCAG CAATATTAAG TTTTTTTGTT ATAAAACCAC AATATGAGGC AAAAACTAAG CTTTTCATTG GTAAGCAAGA GACTACTCAA GAAAATGCAT CTTATAATAA TAATGATGTT ATGATGTATC AAAAACTTAT GAAGACTTAT GCAGAACTTG TAAAGACTTC AGACTTAGTT ACTAAGGCAG TTAAAAGTGC TAACTTAGAT TATAATCAAA ATCAAATAAG AGGGATTTTA AATAATCTTA ATGTTACTCC AAGTGCGGAT ACTCAAATAT TAGATTTAAG CTTTAAGGGA GGCAATCCTA AGGAAGTTTT AAAGGTATCA GAGGCCATAA CAAATGAATT TATTTCGGAA TCTAAGGAAC TTATTCCAAA TGGAAATGTA CAAGTTATAC AAAAACCACA ACTTCCAGAA CATCCAGTAA GTCCAAATAA GAAGCTTAAT ATACTTATTG CTTTTGTTTT AGGACTTATG TTAGGAGTAG GAGTAGTACT TTTAATAGAA TACTTAGATA ATACTTTTAA ATCAAGAGAA GAACTGGAAA AAACTTTAGA TTTACCTATA ATAGGAGCTA TTCCAGATTA CGATAGTATA GAAAAATAA
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Protein sequence | MEENTISLQE IAYALKKRWK LIALITIAAT LVSAILSFFV IKPQYEAKTK LFIGKQETTQ ENASYNNNDV MMYQKLMKTY AELVKTSDLV TKAVKSANLD YNQNQIRGIL NNLNVTPSAD TQILDLSFKG GNPKEVLKVS EAITNEFISE SKELIPNGNV QVIQKPQLPE HPVSPNKKLN ILIAFVLGLM LGVGVVLLIE YLDNTFKSRE ELEKTLDLPI IGAIPDYDSI EK
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