| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0440 |
|---|
| Symbol | |
|---|
| ID | 4202366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 526466 |
|---|
| End bp | 527518 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638081324 |
|---|
| Product | iron compound ABC transporter, iron compound-binding protein |
|---|
| Protein accession | YP_694897 |
|---|
| Protein GI | 110800446 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.576038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA GAAAAAAATT ATTAGCCTTA ACATTAACTG CTTTAGTATC TATGGGAGTT
TTAGCTGGGT GTGGACAAAA AAATCAGGAA GCTAAGGCAG AAGAAACTGG ATCAGGAGAG
AAAGTTGTCA ATGTTTATTC ATCAAGACAT TATGATATAG ATAAGCAATT ATTTAAAGAT
TTTGAATCTG ATACAGGGAT AAAAGTAAAT TTAGTTGATG GAAAAAGTGA TGAGCTAATT
GAGAGAATGG CAAGAGAAGG AGATAATACA TCTGCTGATG TATTTTTAAC TGTTGGAGCA
GAAAATATAG CTCAACTTAA TGAGAAAGAT TTAATAAAGG ATATATCATC AGAAAAAATA
AATGAAAATA TACCTTCAGA ATATAGAGGG AAAAACTGGG TTGGATTAAC TTCAAGAGCA
AGAATCATTG TTTATAATAA GGAAAAGGTA AATCCAGAAA CAATAAAAAC ATATAATGAT
TTAACTAAGG ATGAATTTAA AGGAAAGGTA TTAACAAGAA GTTCAAGTTC ATCATATAAC
AATGCTTTAC TTTCATCTTT CATTCAATTA GATGGGGCTG AAAAGGCAAA AGAATGGGCT
CAAGGTATTG TTAATAATTT TGCTAGGACA CCAGAAGGAA ATGATAGAGA TCAGGCTAAA
GCTATTATGG CTGGAATAGG TGATGTTGGA ATAATGAACT CATACTATAT TGCAAAGATG
ATATCTTCAT CAGATGCAGA AGAAGCTAAA GTTGGTAAGG AAATAGGAGT TTTATTCCCA
GAAAATACTC ATTTAAATTT AAGTTTTGGA GCAGTTACAA AGAATGCTAA AAATGAAGAA
AATGCAGTAG CATTATTAGA ATATTTAACT GAAGAAAAAG CACAAAAAGC ATATGTTGAC
GAAAATGGAG AGTTTGCTTT AAATACTAAA GTTGGTAAGA GTGAATTACA AAAATCATGG
GGAGAATTTA CAGTTCAAAA TTTAAACTAT GAAATTTTAG GAGAATCAAA ACAAGAGGCT
ACATTAATTT TTGATCAAGT AGGATGGAAA TAA
|
|---|
| Protein sequence | MLKRKKLLAL TLTALVSMGV LAGCGQKNQE AKAEETGSGE KVVNVYSSRH YDIDKQLFKD
FESDTGIKVN LVDGKSDELI ERMAREGDNT SADVFLTVGA ENIAQLNEKD LIKDISSEKI
NENIPSEYRG KNWVGLTSRA RIIVYNKEKV NPETIKTYND LTKDEFKGKV LTRSSSSSYN
NALLSSFIQL DGAEKAKEWA QGIVNNFART PEGNDRDQAK AIMAGIGDVG IMNSYYIAKM
ISSSDAEEAK VGKEIGVLFP ENTHLNLSFG AVTKNAKNEE NAVALLEYLT EEKAQKAYVD
ENGEFALNTK VGKSELQKSW GEFTVQNLNY EILGESKQEA TLIFDQVGWK
|
|---|
| |