Gene CPF_0432 details

Gene Information

• Locus tag: CPF_0432
• Symbol: lepB
• ID: 4203251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 518534
• End bp: 519076
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638081316
• Product: signal peptidase I
• Protein accession: YP_694889
• Protein GI: 110801367
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0681] Signal peptidase I
• TIGRFAM ID: [TIGR02227] signal peptidase I, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0849039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTAT TATCTGAAAG CAATATATCT ACATTAAATA AAAAATCACA CTTAAAAATA 
AAAAATTTAA TACTCTTTTC TGTAATAGTT TTTTTAGGCT CTTATTTTTT AACCAATTAC 
CTAATTTTCA AAGCTTATAT TCCTACTGGT TCTATGAGAC CTACAATAAT GGAAGAAGAT 
GAAGTAATTG TTAGTAAAAT TTACACTAGT ATAAATAGAG GGGATATCTT TGTATTCAGT 
CATGAATCCT CCGAAGAATT GCTTATAAAA AGAGTTGTTG GTCTTCCTGG CGAAAAAGTT 
GAATTAAAAG ATGGGCTTTT ATATGTAAAT GATGTTTTTA TTGATGAACC TTATGTGAAA 
AATAATGAGT CAATGAATAA AACTTTTTAT GTTCCTGAAG GAAACTACCT ATTTTTTGGT 
GATAATAGAG CAAGATCAGA AGATGCAAGA AGATGGGAAA ACCCCTATGT TCCTAAAAAA 
AATTTAGATG GGAAAGCTCT TTTTACTGTA TACCCTAAAG ACAGAATTGG ATTTTTAAAA 
TAA 

 

Protein sequence

MNLLSESNIS TLNKKSHLKI KNLILFSVIV FLGSYFLTNY LIFKAYIPTG SMRPTIMEED 
EVIVSKIYTS INRGDIFVFS HESSEELLIK RVVGLPGEKV ELKDGLLYVN DVFIDEPYVK 
NNESMNKTFY VPEGNYLFFG DNRARSEDAR RWENPYVPKK NLDGKALFTV YPKDRIGFLK