Gene CPF_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0419 
Symbol 
ID4200949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp500854 
End bp501573 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content23% 
IMG OID638081303 
Producthypothetical protein 
Protein accessionYP_694876 
Protein GI110798749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.613009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTGTT CTAAATGTGG TAAGGAGATA CCAAATGAAT CAGTTTTTTG TCCAGAGTGT 
GGATGTAAAT GTAAATCAGA TATGGATAAT AAAATAAGAG AAACAAGTGC AATAGAAATC 
AAAGAACTTA TAACAAAAGT AATATGTAAT CCGATAAGCA CTGTGAAAAA TGAGGCAATT 
AAATTATCAT CTCAAAATAA ATTAATATAT ATTATAATAA CTTCATTGAT TACACCATTA 
ATAACAATCT TTTCTTTTAA AACCTATGGT TCTGGTTTGG TTAAATATAT AATAAATTCT 
ATACCTATGC AAAAAGTTTA CATTTTAAAC TTAGGAAGCT ATATTATTAA TTATGTACTC 
TTATTGGGAA TAATATATAT TTTGTTTAAA TCCCTCATGA AGGATAAAAT TGATAAAACA 
AATGCTATGG ATATAATGCT TACAATTTCA ACATTTAATA TGTTATTAGA GATAATAGCT 
GCAATAGTTT TGTTTTTAGG CGTAATACCA TGGGTGATAT TAAAAGTATT TAGCATGATA 
TTATTAATAA TATTAATGTA TAGTTTATTA AATAGTTTAT TAATATTAAA GGAAAAACTT 
ATATATATAT ATTCAACAGC TTTGGTTGTT ATTGCTTTAA TAAATATGTG GTTTGTTTTC 
AAAAATGTAG GATCTATAAT TTCTGATATG TTTTTTAGTA ACATTTTAAA ATTTATGTAG
 
Protein sequence
MYCSKCGKEI PNESVFCPEC GCKCKSDMDN KIRETSAIEI KELITKVICN PISTVKNEAI 
KLSSQNKLIY IIITSLITPL ITIFSFKTYG SGLVKYIINS IPMQKVYILN LGSYIINYVL 
LLGIIYILFK SLMKDKIDKT NAMDIMLTIS TFNMLLEIIA AIVLFLGVIP WVILKVFSMI 
LLIILMYSLL NSLLILKEKL IYIYSTALVV IALINMWFVF KNVGSIISDM FFSNILKFM