| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0412 |
|---|
| Symbol | |
|---|
| ID | 4203584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 493292 |
|---|
| End bp | 494182 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 638081296 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_694869 |
|---|
| Protein GI | 110800610 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.224421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGAAT ATGATTTAAT TATAATTGGT GGAGGAGCAT CAGGTCTTCT TTTAGCTATT
AATGGTAAAA AGGACGGAAT AAAAAATATT CTTTTAGTAG AGAAAGATCC AATTTTAGGT
GGAGCTTTAA ATTCAGCTGA TTACAATATA AGCGAAAAGG GTAATTTAAC AGGTATAGAA
TATAAAGAAA GTTTATTAAA AGAATTTAAT GAGCTTAATA TTGATGTTAA ATTAAACACT
ATGGTTTTAA AAATAGAAGA TTCAAATGAA ATACTTTGTA CAAGCAGTGA ATATGGTGTA
GAGAAAATAA AAGGTAAAAA CATAATAATT ACTAATGGTG GAAAAGAAAA AAGTAGAAAT
GCAGTTCAAA TTCCAGGGGA TCGTACAGCA GGAGTTTTAA CTGTAGGAAT GGCTAAAAAG
ATTTTTGGAA TTAAAAATAT GGTTCCAGGA AAAAATATCT TCATAGTAGG AGATAGCACT
CTTTATATGA TTCAAGAGGA TTTAAAAAAG CATAATATTA AGGTTTCTGG AATCATAACA
GATAAAAATA AAAATGAAGT TTTTGATTTA AGTGAAAATT TATACCCTGG ATATGAAATT
GTCTCTATAC ATGGAGAAGG AAGAGTAAGC TCTGTAACCA TAAAAAATGA TGATGAAAAG
AAAAATATAA AATGTGATAC AGTAATTTTT GCTTATCCAA TGATTTCAGA TGGATTAGTT
GCATTAAGAA GTGGACTTAA ATTAAATCCA AGTACAACTG GTCCAGCTGT AGATGAAAAT
TTAGAAACTT CAAGCAAAAA TATATATGCT TGTGGAAATG CAATCTACAT TCACAAATCA
ATAGAAGAAA TTGAAGATGA GTGTAAAAAG CTTATTAAAA CTATAAGTTA A
|
|---|
| Protein sequence | MREYDLIIIG GGASGLLLAI NGKKDGIKNI LLVEKDPILG GALNSADYNI SEKGNLTGIE
YKESLLKEFN ELNIDVKLNT MVLKIEDSNE ILCTSSEYGV EKIKGKNIII TNGGKEKSRN
AVQIPGDRTA GVLTVGMAKK IFGIKNMVPG KNIFIVGDST LYMIQEDLKK HNIKVSGIIT
DKNKNEVFDL SENLYPGYEI VSIHGEGRVS SVTIKNDDEK KNIKCDTVIF AYPMISDGLV
ALRSGLKLNP STTGPAVDEN LETSSKNIYA CGNAIYIHKS IEEIEDECKK LIKTIS
|
|---|
| |