| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0410 |
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| Symbol | |
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| ID | 4201285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 490894 |
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| End bp | 491718 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081294 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_694867 |
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| Protein GI | 110800863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.661813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA AATTAATATG CATTGATATG GATGGTACTT TACTTATGGA TCAGCAAAAT
ATTGCAGAAG AAGATAAAAA TGCAATAAAA GAAGCTGTAA AAAAGGGAGC AATAGTAGCC
ATAACCACAG GAAGAATTTA TGATTGTGCA AGAATGTACT CAGACACAAT AGGTTTAAAA
ACTCCAATTA TAGCTAGTAA TGGAGCTTAT ATTGGAGGAG TAAATGACGA AGAAATATAT
AATAATCCTC TTAAACAAAG TGATTTAGAG GATTTTAATA TAATAACTAA GAAAAATAAT
TTATTTACAT ATGTAACTAC AAACTGGGGA ATTGTTTCAA CAGTAGAATT ACCAGAAAAT
CATGTTTATA AGGTTTTAAA TAAAACTTTA CCTAAAGATA AACAAGTGAG ATTAGAGGTT
GTTAAGGATT TAGATGAAGC ATTCAAAAAG TATAAGGGAG AAATATTAAA GGGTGTTTGT
GTAGAAAAAG AATTTAAAGA TAAATTAAAA GAAGCAAAAG AAGAATTAAT AGCTTGTACA
ACTGATTTAG AAGTTGTTTC TTCTTGGGAT GATAACTTTG AAATAATGAA AAAGGGAAGT
TCAAAGGGAG AAGCTGTTCA AATGCTTGCA AAATATTTAG GTGTTTCTCA AGAGGAAGTA
ATGTGTATAG GTGATAGCGA AAATGATTTA TCAATGATAA CTTGGGCTGG AACTGGTGTT
GCCATGGGAA ATGCTATAGA TTCAGTGAAA GAGTTTGCAA ACTATGTAAC ATCAGACAAT
AAGCATGGAG GCGTTGCAGA GGCTATAAGA AAATTTGTAC TTTAA
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| Protein sequence | MSIKLICIDM DGTLLMDQQN IAEEDKNAIK EAVKKGAIVA ITTGRIYDCA RMYSDTIGLK
TPIIASNGAY IGGVNDEEIY NNPLKQSDLE DFNIITKKNN LFTYVTTNWG IVSTVELPEN
HVYKVLNKTL PKDKQVRLEV VKDLDEAFKK YKGEILKGVC VEKEFKDKLK EAKEELIACT
TDLEVVSSWD DNFEIMKKGS SKGEAVQMLA KYLGVSQEEV MCIGDSENDL SMITWAGTGV
AMGNAIDSVK EFANYVTSDN KHGGVAEAIR KFVL
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