| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0408 |
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| Symbol | |
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| ID | 4201988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 488700 |
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| End bp | 490046 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081292 |
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| Product | putative reticuline oxidase |
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| Protein accession | YP_694865 |
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| Protein GI | 110800379 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.486233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGG TTGATTTTTC TAAATTTACT GGTGATTTAG TAACTAGAGA AAATATAGAG
TATGAAAAAA GTATAGAATC TTGGAATAGA GCTATAAAAA AATATCCTTT AGGGATAGTT
TTTTGTAATA ATATTGATGA TGTAAAAAAT GCTTTAGAAT GGGCTAAAGA AAATAATATT
CCATTTAGAA TAAGAGTTGG ACGTCATAAC TATGAAGGAT ACTCCATAGG AAATGATGTA
TTAGTAATAG ATTTAAGTAA AATGAATAAT ATAATCATTG ATGAAGAAAA TATGAAAGTT
ACTATAGAAG GTGGCGTTAA AAATGAAGAA ATATATGAAG CCTTAGGTGT TTTAGGATAT
CCATTTCCAG GAGGGGGATG CCCTACAGTT GGTGTTGTAG GCTTTGCTCT TGGTGGAGGT
TGGGGATATT CAAGTAGATT ACTTGGGCTT GGATGCGACA ATCTTCTAGA AGTAAAGTTT
ATAAATAGCA AAGGGAAAAT TGTTATAGCT AATGAATATG ATAATTCTGA TTTATTCTGG
GCTGCCAAAG GGGGTGGAGG TGGAAATTTT GGAGTAGTTA TTTCAATGAC CTTTAAAATT
CCTCAAAAAA TAGAAATGGC AACTTTAATA GATATAGATT ACCCTAATGC GGAAAAAGAA
GAACTTGTTT ATGTAATAAG AACATTACAA AAAAAGTTCA AGAACTTAGA TAGGAGAATG
AACTTAAAAA CAGCTATCTA CAATTCAAAG GATAAGGGAA TTGGAGTTAA GATTACAGGA
TTATTTTATG GACATAAAGA AGAAGCTAAT GAAATATTAC TTCCATTTAA GTTACCAACA
AGGGTTAATT TTAATTTAAG TTATATGAGA GTTTTAGAAG CTAATAGAAA GATTGAATAT
AGTCATCCTC CTTATGAAAA ATACAAATCA ACAGGAAGAT TTGTATTTAG AGATTATGAT
AACTGTGAAA TAGAGAAACT TATAGATATA GTTTCAAATA GAGCAGAGGG AGCATATTAT
ACTGCCATAT CCTTTTATGG CCTAGGTGGC GCAGTAAAAG ATGTTCATAA GAATTCATCA
GCTTTTTACT ATAGAGATGC AAGGTTTATT ATGGGAATAC AATCTGTTTG GGAAGATGAT
ATCTTTGCAG AAGAAAATAT AAAATGGATT AAAAATAATT TTAAATACAT AGAAAGCATA
ACTACTGGAT CATTTATAAA CTTTCCTTTT AAAGACCTTA AGGATTATGA AGAAGAATAT
TATGGAGAAA ATAAGGACAA GCTAAGAGAG ATTAGAAAAA AATATGATGA AAATAAATTC
TTTGCCTTTG AGCAGGGAAT AAAATAA
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| Protein sequence | MEKVDFSKFT GDLVTRENIE YEKSIESWNR AIKKYPLGIV FCNNIDDVKN ALEWAKENNI
PFRIRVGRHN YEGYSIGNDV LVIDLSKMNN IIIDEENMKV TIEGGVKNEE IYEALGVLGY
PFPGGGCPTV GVVGFALGGG WGYSSRLLGL GCDNLLEVKF INSKGKIVIA NEYDNSDLFW
AAKGGGGGNF GVVISMTFKI PQKIEMATLI DIDYPNAEKE ELVYVIRTLQ KKFKNLDRRM
NLKTAIYNSK DKGIGVKITG LFYGHKEEAN EILLPFKLPT RVNFNLSYMR VLEANRKIEY
SHPPYEKYKS TGRFVFRDYD NCEIEKLIDI VSNRAEGAYY TAISFYGLGG AVKDVHKNSS
AFYYRDARFI MGIQSVWEDD IFAEENIKWI KNNFKYIESI TTGSFINFPF KDLKDYEEEY
YGENKDKLRE IRKKYDENKF FAFEQGIK
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