Gene CPF_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0388 
Symbol 
ID4201363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp467626 
End bp468267 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content24% 
IMG OID638081272 
Productcyclic nucleotide-binding protein 
Protein accessionYP_694845 
Protein GI110801018 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTT ATGAATTAAT AGAGTTTATA AATAACTGTC CAAAGGAAAT TAAAAAAGAA 
TTAAAGAATA GAAGTTTTAA ATATGGAGAA AAGTTATTAG TTCAAAATGA GAATTGTGAT 
TTTGTATATA TCTTATTAAA GGGAAAAATT AAAACATATC ATTGTGATTT TACAGGAGCT 
ATATATCTAG AAGATATTGA TAGTGAAGCT ACAATATTTG GTGAACTAGA AGCCTTAATT 
AATAAGGAAG TAGTTACTAC AGTGGAGGCT CTATCACAAT GTGAGACCTT AGAGATAAGC 
AAAGAATCTT TTATTAAGTG GATAGAATTA GATAATAAAT TTTCATTATT TATAAGTAAG 
CTTATAGCAG AGAGAAATTA TGAATGTTGC AAAAGAGAAC GAGTTAATGC CTTTTATAAT 
TTAAGATATA GGGTAATGTA CATAATATTA AATACACTTC ATAAAAATAA TTTAGGAATT 
ACTAAGGATT TATTAGTTGA AGGGGTAGGT TCTAATATTA GAAGTATAAA TAGAATAATA 
AATCAATTAA TAGAAGAAGG AATTCTTGAT TATAATTCAG GTAAAATAAA AGTTAAATCA 
ATAGAAAAAC TTAAAGAAGA AGTTAATTAT TATAAGCCTT AA
 
Protein sequence
MKSYELIEFI NNCPKEIKKE LKNRSFKYGE KLLVQNENCD FVYILLKGKI KTYHCDFTGA 
IYLEDIDSEA TIFGELEALI NKEVVTTVEA LSQCETLEIS KESFIKWIEL DNKFSLFISK 
LIAERNYECC KRERVNAFYN LRYRVMYIIL NTLHKNNLGI TKDLLVEGVG SNIRSINRII 
NQLIEEGILD YNSGKIKVKS IEKLKEEVNY YKP