Gene CPF_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0374 
Symbol 
ID4201588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp451426 
End bp452157 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content28% 
IMG OID638081258 
ProductGntR family transcriptional regulator 
Protein accessionYP_694831 
Protein GI110801281 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAT TAACTGTAAA TAAACATAAA GAACTCTTAT ATGTTACCGT ATACGATAAA 
CTTTTTAAGA TGATTAACGA AGGAACTTTC CCTGAAAATA GTAGACTTCC TTCTGAACCG
GAACTAGCTA AAAGATTAGG TGTTAGTAGA AGTACACTTA GACAAGCTTT AGCCCTGCTT
CAAGATGATG GATTAATAAA AAACATTAGA GGTAAAGGAA ATTACATAAT TAAAGAAAAT
AAAACTGATA CAACAGGTTT AGAAAAAATA GGACATCCAG TATATAAGTG TTTAGATGTA
GAGACAAATA ATATTGAATT AGATTTTAAA ATAGATCCAC CCTCAGATTA TTATAAAAAG
ATATTAGGAG ATAGTTCTGT TGCAACGGTT TGTATTGATA GATGGTATTT AAATGATAAT
TTAGCTCTAG CTTATTCTTA CACAATAATA TCTATTGAGG CAATTTCAAA ATTTAATATA
GATCTATCAG ATAAAAATAA TTTATTGAAA TTCATTGAAG AAGAATCTTA TAAAGAATGC
TCAAAGATAA AAAGTACTAT TAAATTCACT ACATCTGGTA ACTTCGTAAC TAAGCGTCGC
CCAATTCCAG ATGAAAGTCA ATTTTATTTA ATTGAGGAAG CTATATATTC TAATTCAGAA
CTTCCAGTTA TTTTTAATAA GCATTATCTC CCAATGAAAC ACAGCACCAT AAAAGTAAAT
CCTATGAAAT AA
 
Protein sequence
MEILTVNKHK ELLYVTVYDK LFKMINEGTF PENSRLPSEP ELAKRLGVSR STLRQALALL 
QDDGLIKNIR GKGNYIIKEN KTDTTGLEKI GHPVYKCLDV ETNNIELDFK IDPPSDYYKK
ILGDSSVATV CIDRWYLNDN LALAYSYTII SIEAISKFNI DLSDKNNLLK FIEEESYKEC
SKIKSTIKFT TSGNFVTKRR PIPDESQFYL IEEAIYSNSE LPVIFNKHYL PMKHSTIKVN
PMK