Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0374 |
Symbol | |
ID | 4201588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 451426 |
End bp | 452157 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081258 |
Product | GntR family transcriptional regulator |
Protein accession | YP_694831 |
Protein GI | 110801281 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAT TAACTGTAAA TAAACATAAA GAACTCTTAT ATGTTACCGT ATACGATAAA CTTTTTAAGA TGATTAACGA AGGAACTTTC CCTGAAAATA GTAGACTTCC TTCTGAACCG GAACTAGCTA AAAGATTAGG TGTTAGTAGA AGTACACTTA GACAAGCTTT AGCCCTGCTT CAAGATGATG GATTAATAAA AAACATTAGA GGTAAAGGAA ATTACATAAT TAAAGAAAAT AAAACTGATA CAACAGGTTT AGAAAAAATA GGACATCCAG TATATAAGTG TTTAGATGTA GAGACAAATA ATATTGAATT AGATTTTAAA ATAGATCCAC CCTCAGATTA TTATAAAAAG ATATTAGGAG ATAGTTCTGT TGCAACGGTT TGTATTGATA GATGGTATTT AAATGATAAT TTAGCTCTAG CTTATTCTTA CACAATAATA TCTATTGAGG CAATTTCAAA ATTTAATATA GATCTATCAG ATAAAAATAA TTTATTGAAA TTCATTGAAG AAGAATCTTA TAAAGAATGC TCAAAGATAA AAAGTACTAT TAAATTCACT ACATCTGGTA ACTTCGTAAC TAAGCGTCGC CCAATTCCAG ATGAAAGTCA ATTTTATTTA ATTGAGGAAG CTATATATTC TAATTCAGAA CTTCCAGTTA TTTTTAATAA GCATTATCTC CCAATGAAAC ACAGCACCAT AAAAGTAAAT CCTATGAAAT AA
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Protein sequence | MEILTVNKHK ELLYVTVYDK LFKMINEGTF PENSRLPSEP ELAKRLGVSR STLRQALALL QDDGLIKNIR GKGNYIIKEN KTDTTGLEKI GHPVYKCLDV ETNNIELDFK IDPPSDYYKK ILGDSSVATV CIDRWYLNDN LALAYSYTII SIEAISKFNI DLSDKNNLLK FIEEESYKEC SKIKSTIKFT TSGNFVTKRR PIPDESQFYL IEEAIYSNSE LPVIFNKHYL PMKHSTIKVN PMK
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