Gene CPF_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0369 
Symbol 
ID4201291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp446200 
End bp447228 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content30% 
IMG OID638081253 
Productglycosy hydrolase family protein 
Protein accessionYP_694826 
Protein GI110799035 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAA GAAATAGTAA TAATTTAAAT GGAATTGATG TGTCAAATTG GCAAGGTAAT 
ATAAATTTTA AAAGTGTAAA AAATGAGGGG ATTGAAGTAG TTTATATTAA GGCAACAGAG
GGAGACTATT TTAAGGATTC ATATGCAAAA CAAAATTATG AAAGAGCAAA AGCTGAGGGC
TTAAAGGTTG GTTTTTATCA TTTCTTTAAG CCTAATAAAA ATGCAAAAAG ACAAGCTAAA
TATTTTATTG ATTATTTAAA TGAGATAGGG GCTACTGATT ATGATTGTAA ATTAGCCTTA
GATGTTGAAA CTACAGAGGG TAGAAGTGCG TATGAACTAA CCACCTTGTG TATAGAATTC
TTAGAAGAAG TAAGAAAGAT AACAAATAGA GAGGTTGTTG TTTACACTTA TACAAGCTTT
GCAAATAATA ATTTAGATAA TAGATTAGGA GTTTATCCCC TTTGGATAGC TGAATATGGA
GTAAAAGCAC CAAAGGATAA TAGAGTTTGG AGTAGTTGGA TTGGGTTTCA ATATTCAGAT
AAAGGGAATG TAGCTGGTGT ATCAGGAAAT TGTGATATGA ATGAATTTAA AGAAGAAATA
TTAGATGTAA AAAATAATTT TAAATTGTAT AATGCAACCA CTAAGAATGT ATCAACTTAT
CTTAATACAA GAGAAAAAGG GGAGATAGAC TCTAAGATTA TAGGGAAGAT ACCAGCCGGA
GAGAAATTTA TGATAAAGTG GGTAGATTCT AATTATTTAG GATGGTACCT TATTGAATAC
AAAAATATTA CTGGATATGT AAGTTCTAAA TATGTAGAAA AATTTCAAAT GGCTACCACC
TACAATGTAA GTGATTTCTT AAATGTAAGG GAGAGAGGAA CTACAGATTC AAAAGTAGTT
GCAATTATAG ATGATGGAGA AATATTTAGA ATTGATTGGG TAGACTCAGA TTATATTGGA
TGGTATAGAA TAACAACTAA GTATGGTAAA AACGGTTTTG TTAAGGCTGA CTTTGTTAAA
AAGATTTAG
 
Protein sequence
MEGRNSNNLN GIDVSNWQGN INFKSVKNEG IEVVYIKATE GDYFKDSYAK QNYERAKAEG 
LKVGFYHFFK PNKNAKRQAK YFIDYLNEIG ATDYDCKLAL DVETTEGRSA YELTTLCIEF
LEEVRKITNR EVVVYTYTSF ANNNLDNRLG VYPLWIAEYG VKAPKDNRVW SSWIGFQYSD
KGNVAGVSGN CDMNEFKEEI LDVKNNFKLY NATTKNVSTY LNTREKGEID SKIIGKIPAG
EKFMIKWVDS NYLGWYLIEY KNITGYVSSK YVEKFQMATT YNVSDFLNVR ERGTTDSKVV
AIIDDGEIFR IDWVDSDYIG WYRITTKYGK NGFVKADFVK KI