Gene CPF_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0367 
Symbol 
ID4202870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp443674 
End bp445455 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content30% 
IMG OID638081251 
ProductABC transporter, permease/ATP-binding protein 
Protein accessionYP_694824 
Protein GI110800287 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.823105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TTAAATCAGT AGTAAAAAAG ATTTCTCCTT TTGTTGGTAA GTATAAGTGG 
GCTTTTTTAG GAGCTATTTT ATTTATAATT TCAGCAGCTG TTTTCACTGC TATAGCACCA
AGAACAGAAG GATTAATAAT AACTCAATTA ACTAAGGATT TTGAGGGAAT TATAAGAGGA
GTTTCTGGAG CTTCAGTTAA CTTTAATTAT ATTTTTAAGG TATTAATCTT ATTATTTTTA
GTTTATGCAG GTGGTACAGG ATCAACTCTT ATAGCAAGTT TCTTATTAAC TAATGCAATT
CAAAATACCA TGAAAAATAT TAGAAATGAA GTTGAGAAAA AAATAAATAG ACTTCCAATA
AGATATTTTG ATGGTAATAG TTATGGAGAT GTACTAAGTA GAATCACTAA TGATGTAGAT
ACCATTTCTA ATGCATTGCA GCAAAGTTTT GTACAGGTAA TAAATGCATT TTTATCTGTA
GGATTAGCTT TGATAATGAT GTATTCAATA AATATTAAGC TAGCATTAAT TGCAACATTA
ATAATACCTT TAAGTATTTT AATTACAAAG ATAATAGTTT CTAAATCTCA GAAATTATTT
AATAGTCAAC AAAAGGCCTT AGGAAATCTT AATGGAAAAG TACAAGAAAT GTACACAGGC
TTTAATGAAT TAAAGTTATA TGGAAAAGAA GATGATGCCT TAAATGAATT TGTAAAGGTA
AATGAAGAGT TAAGAGAAAC AGGGTTTAAA GCTCAATTTA TATCAGGTAT AATGTCACCT
TTAATAAGTC TTGTTACTTA TTTAGGAATA GCTGTGGTAG GGGTAGTAGG TTCTATAATA
GCTATAGGTG GTGGAATTAC CGTTGGTAAT CTTCAAGCAT TTATACGTTA TATTTGGCAA
ATAAATCAGC CTTTATCTCA AGTAACTCAA TTATCATCAG CAATACAATC AGCAGTGGCT
GCCGCTAATA GGGTTTTTGA ATTCTTAGAG GAAGAAGAAG AGGTTAAAGA TCCTAATAAT
GCTATAAAAA TTGAGAAGCC AAAGGGAGAT GTAACTTTTG ACCATGTTAA ATTTGGATAT
AAGGAAGATA AGCCACTTAT AAAAGATTTA AGCGTAGATG TCAAAAGTGG TCATATGGTT
GCCATTGTTG GAAAAACTGG AGCAGGTAAA ACTACTCTTA TTAATCTTTT AATGAGATTT
TATGATGTTC AAGGGGGTTC AATTAAAATA GATGGTGTTG ATATTAGAGA TATGAAACGT
GAAGATTTAA GATCTATGTT TGGTATGGTT CTTCAAGATA CATGGCTATT TAATGGAACT
ATTTATGATA ATATTAGGTA TGGTAGATTT GATGCCACTA AAGAAGAAAT AATAGAGGCA
GCAAAGGTTG CAAATGTTCA TCATTTTATA AAAACATTAC CTGGCGGATA CAATATGTTA
TTAAATGAAG AGGCTTCAAA TGTATCTCAG GGAGAAAAGC AACTTTTAAC TATAGCTAGA
GCAATTTTAA AAGATCCAGC TATATTAATA CTAGATGAGG CCACAAGTTC AGTTGATACT
AGATTAGAAT TATTACTTCA AAAGGCCATG AGAAATATAA TGAAGGATAG AACTAGCTTT
GTTATAGCTC ACAGACTTTC AACTATAAGA AGTGCAGATT TAATATTAGT AATGAATGAT
GGTAATATAA TTGAACAGGG AACTCATGAA GAGTTAATGA AGCAAGGTGG TTATTACGAA
AGTCTTTATA ATAGTCAGTT TGCTAGTAAA GAAGTAAATT AA
 
Protein sequence
MNKFKSVVKK ISPFVGKYKW AFLGAILFII SAAVFTAIAP RTEGLIITQL TKDFEGIIRG 
VSGASVNFNY IFKVLILLFL VYAGGTGSTL IASFLLTNAI QNTMKNIRNE VEKKINRLPI
RYFDGNSYGD VLSRITNDVD TISNALQQSF VQVINAFLSV GLALIMMYSI NIKLALIATL
IIPLSILITK IIVSKSQKLF NSQQKALGNL NGKVQEMYTG FNELKLYGKE DDALNEFVKV
NEELRETGFK AQFISGIMSP LISLVTYLGI AVVGVVGSII AIGGGITVGN LQAFIRYIWQ
INQPLSQVTQ LSSAIQSAVA AANRVFEFLE EEEEVKDPNN AIKIEKPKGD VTFDHVKFGY
KEDKPLIKDL SVDVKSGHMV AIVGKTGAGK TTLINLLMRF YDVQGGSIKI DGVDIRDMKR
EDLRSMFGMV LQDTWLFNGT IYDNIRYGRF DATKEEIIEA AKVANVHHFI KTLPGGYNML
LNEEASNVSQ GEKQLLTIAR AILKDPAILI LDEATSSVDT RLELLLQKAM RNIMKDRTSF
VIAHRLSTIR SADLILVMND GNIIEQGTHE ELMKQGGYYE SLYNSQFASK EVN