Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0364 |
Symbol | |
ID | 4201462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 438829 |
End bp | 439407 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081248 |
Product | TetR family transcriptional regulator |
Protein accession | YP_694821 |
Protein GI | 261876160 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.233701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTCAGC AATATACTAA AAAAATGATT CGTAGCGTAT TTATAGAGTT GTTAAATGAA AGACCGCTAA ATAAGATTAC TGTAAAAGAT ATAGCATCAG CTTGTGGAAT TAATCGAAAT ACTTTCTACT ATTATTATTC AGATATGTAT GAGCTTTTAT CTGAACTTTT TCAAACTGAG CTTCAAAATG TTATAGATGA ATATAATGAC ACTATGTCTT GGGAGGAAAG CTTTGTACTA GCAACAAGGT TTGCCTTAGG AAATAAGAAA GTAATTTATC ATGTATATAA TTCAATGCAG AGGGAAGAAT TAGTTAATTA TATTTACAAT GTTTCAGGAA ACATGATGGA GAGGTATGTT AAGAAGTTAA GCCATGGAAT AAATGCTTCT GAATATGACA TGAAACTAAT AGCAACTTTC TATCAATGTG CACTTACAGA AATGGTAATT CAATGGATTT CTTCTGGAAT GAAGGAAGAT CCAGATGCCA TCATAAGAAG AATAGGAAAA TTATTTGATG GAAATATAAA ATTATCACTT CAGCGTAGTG AAGAGTTTAA TAAAATTGGT GAGAAATAA
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Protein sequence | MAQQYTKKMI RSVFIELLNE RPLNKITVKD IASACGINRN TFYYYYSDMY ELLSELFQTE LQNVIDEYND TMSWEESFVL ATRFALGNKK VIYHVYNSMQ REELVNYIYN VSGNMMERYV KKLSHGINAS EYDMKLIATF YQCALTEMVI QWISSGMKED PDAIIRRIGK LFDGNIKLSL QRSEEFNKIG EK
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