Gene CPF_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0345 
Symbol 
ID4202429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp410913 
End bp411863 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content32% 
IMG OID638081231 
Producthypothetical protein 
Protein accessionYP_694804 
Protein GI110798732 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00647] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTT CAGCAAAAGT AAAGGGAGAA ATATGTAGAT ATATTGATAT ATCAAAAGAG 
GAAGCTCTTG CTCAAATATC AGCTATCATG AAAGTATGCG GTACACTTGC TTTTAGTGGT
AGACAAATAA GCTTCAAAAT GACAACAGAA AATCCTGCAT CTGCAAGATT GATGTTTACT
ATATTAAAGG ATTACTTCGA CATACATGCA AAGCTTATGG TTAAAAAAAG TAATTCCTTA
AAGAAAAATA ATATTTATAT GGTTGTTGTA ACTGAAGAAA TGGGAGTAAA AAAATTACTT
GAAATAACAG GTATATTAAG AGAGATAGAT GGAATAATGT CACTAGACTA TCATATAGAT
GAGAATTTAG TTGATACAGA AGAAAAGAAA AAAGCTTATA TTAGAGGAGC CTTCATTGGT
GGAGGAAGTA TAAGTAATCC AGAAAAAACT TACCATTTAG AGTTTGTTAC TCACTCTCAA
GAATATGCAG AGGATCTAGG AAAGCTAATT AATACTTTTG GTTTAAAAGC TAAGGTGATA
CAAAGAAAAA ATAGTTATAT AGTTTATATA AAAGAGGGAG AGCAAATAGT AGATTTATTA
AATATAATAG GAGCTCACAC TGCACTTTTA GAACTTGAAA ACATTAGAAT CATGAAAGAG
ATGAGGAATA ATGTAAATAG ACTTGTAAAC TGTGAAACTG CAAACCTTAG TAAGACTGTA
AATGCAGCGG TTAGACAGGT TGAGAGTATA AAGCTTATAG AAAGAGAAAT AGGTCTTGCA
AGGCTTCCTA AGAATTTAAG AGAAGTTGCA GAGCTTAGAT TAACTTATCC TGAGGAATCC
TTAAAGGAGC TTGGTGAAAT GCTTGAACCA CCAGTTGGAA AATCAGGAGT AAATCATAGA
TTAAGAAAAA TTGAAAAAAT AGCTGAAGAG CTTAGAACAG GCAACTTCTA G
 
Protein sequence
MSFSAKVKGE ICRYIDISKE EALAQISAIM KVCGTLAFSG RQISFKMTTE NPASARLMFT 
ILKDYFDIHA KLMVKKSNSL KKNNIYMVVV TEEMGVKKLL EITGILREID GIMSLDYHID
ENLVDTEEKK KAYIRGAFIG GGSISNPEKT YHLEFVTHSQ EYAEDLGKLI NTFGLKAKVI
QRKNSYIVYI KEGEQIVDLL NIIGAHTALL ELENIRIMKE MRNNVNRLVN CETANLSKTV
NAAVRQVESI KLIEREIGLA RLPKNLREVA ELRLTYPEES LKELGEMLEP PVGKSGVNHR
LRKIEKIAEE LRTGNF