Gene CPF_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0343 
Symbol 
ID4201675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp408684 
End bp409568 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content31% 
IMG OID638081230 
Producthypothetical protein 
Protein accessionYP_694803 
Protein GI110801000 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTG TAATAGTTAC TGGACTTTCA GGGGCTGGAA AAACAGAAGC AACAAGAAGT 
TTAGAAGATT TAGGATACTT TTGCGTAGAT AACTTACCTC CAAAGTTAAT ACCTAAGTTT
GCAGAGGCCT GTGTTCAAAG TGAAGGTAAA ATAGATAAAA TAGCATTAGT AATAGATATA
AGAGGCGGAA TATTCTTTGA TGATTTATTT GAAAGTATAG AGTATTTAAA AGCTAATGAT
TTTAATTACG AAATTTTATT CTTAGAGGCT TCTGATGAGG TTTTAGTTAA GAGATTTAAA
GAAACAAGAA GAAGTCATCC GCTTTCACCA GATGGAAGAA TAATAACTGG TATAAGTGAA
GAAAGAATGA GACTTAGAGA ACTTAAGGAT AGAGCTGATA ATATAATAGA CACTTCAAAT
TATCCTATAA GAAATTTAAG AGAAAAAATA AATCTTTTAT ATGGAGATGG TAAGCCAGTT
GAGCAAAATC TTTCAATAAC TGTTTTATCC TTTGGATTTA AGTATGGTAT TCCATCAGAT
TCAGATTTAG TTTTTGATGT TAGATTTATA CCAAATCCAT TTTATATTCC AGAGTTAAAG
CCATTTTCAG GGGAAGATGA ACCAGTTAAA AATTATGTTC TTGCTCAAGA AGAAACAAAA
GGATTTTTAT CAAGACTTTC AGATATGGCA GAATTCTTAA TCCCTAATTA TATAAAAGAA
GGAAAGAGAC AACTTATTAT CTCTATTGGA TGTACAGGGG GAAGACATAG ATCAGTAGCC
ATAGCTAATG CTTTATATAA AGACCTTCTA TGTAAGAACT TCCATGTTAC CTTAGAGCAT
AGAGATATTA ATGAGGATAT AAATAGGGGA GATAGAAAAC TATGA
 
Protein sequence
MRFVIVTGLS GAGKTEATRS LEDLGYFCVD NLPPKLIPKF AEACVQSEGK IDKIALVIDI 
RGGIFFDDLF ESIEYLKAND FNYEILFLEA SDEVLVKRFK ETRRSHPLSP DGRIITGISE
ERMRLRELKD RADNIIDTSN YPIRNLREKI NLLYGDGKPV EQNLSITVLS FGFKYGIPSD
SDLVFDVRFI PNPFYIPELK PFSGEDEPVK NYVLAQEETK GFLSRLSDMA EFLIPNYIKE
GKRQLIISIG CTGGRHRSVA IANALYKDLL CKNFHVTLEH RDINEDINRG DRKL