| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0330 |
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| Symbol | |
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| ID | 4201023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 393418 |
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| End bp | 394857 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081217 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_694790 |
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| Protein GI | 110801163 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTTTG GAGTCTATTT CTTTGTTACA GCTTTGATTA TATTAGGAGT AACTTTATTT
CTAAAAAAGA AGCTAGTGGG TAAAGATAGA GAATTTTATA AGGTATTATT AGTTTTATGT
ATTCCAATAA TAGTTCAAAA CTTTATATCA ACTTCTGTAA ATGTAATTGA TACAGTTATG
ATAAGTAGTT TAGGTGAGGA ATCTATAGCA GCTGTTGGCG TGGCTAATCA GGTGTTTTTC
TTATTTAATA TGGGATTAAT AGGATTAACA GGAGCTACAG GACTTTTCAT ATCTCAATTT
TATGGGAGTA ATGATAGAAA AAGTATAAAG AAAGTTATGG GACTAAGTAC TATTTTATGT
GTGGGATTTA GTTTTATTTT CTTTGTTTTA GCATTTTTCT TTCCAGAGCT TATAATAGGA
ATCTTTTCTA CTGACCCAAA AGTAGTTGAA CTTTGTAAAA ATTATTTAGT TGTTATTGCT
ATTTCATATC CTTTAACAGC CTTGAGCATG GTAATAAGTG CAGGGGCTAG GGCTGTGAGA
AATCCTAAAC TAGGAATGTT TTGTAGTGGA GCTTCTCTTA TTATAAATAT TATATTTAAT
TATTGCTTAA TATTTGGAAT AGGTATATTC CCAGAGTTAG GTGTTAAGGG AGCAGCTATC
TCTACTGTAT TTGCTAGAAT AATAGAATGT TTATTATTAG TTGGATATGT TATTTTAAAA
GATAAAGATT ATATTATTAA GTTTAATATA AATGATATTA GAGGAATAAA TAAAGACTTT
TTCAAAGTTT ATATGTCTAA GGGAATGCCT ATATTTATAA ATGACTTTGC TTGGGCTATT
GGATCGGTTT CATACTCTGT AGCTTATGCA ATGGTTGGTA CATCAGCAAT AGCAGCAAGT
CAGATTGCAA CTAGCACAGC TAATCTATTT ATAATGTTAG CTATGTGTAT AGCTACTGGA
GCAGCTATTA TGCTTGGAAA TGAGCTTGGT GCAGATAATA CTGATAGAGC TATAGATTAT
TCTAATAAGT TTTCTAAGAT AGTTTTTGTT GTAGGAAGTA TTTTAGGAGG AATGTTAATA
TTAAGTATTC CAATATTACT TAAAGTTTAT AGTACATCTT CAACTATGGC TGGAGATTTA
AGCAAAATTT TTGTAATAAT GGGAGTTCTA ATGGGCTTAA AATCATTTAA TATTCTAGTG
ATTGTAGGAA TATTAAGAAG TGGAGGAGAT ACAAAGTATG CCTTTGCACT AGAATTTGGC
TGTATGTGGC TTGTATCAAT ACCATTAACA TTCTTTGGAG CAATAAATGG CTTTCCAATA
TATATGTTAG TATTATTTAC TTATTCAGAA GAAATAGTTA AAGCCATCTT TGGATTGCCT
AGAGTTTTAT CAAAGGTTTG GGTAGTTAAT TTAACTAAAG ATATAGAAAT AAGTGGATAA
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| Protein sequence | MYFGVYFFVT ALIILGVTLF LKKKLVGKDR EFYKVLLVLC IPIIVQNFIS TSVNVIDTVM
ISSLGEESIA AVGVANQVFF LFNMGLIGLT GATGLFISQF YGSNDRKSIK KVMGLSTILC
VGFSFIFFVL AFFFPELIIG IFSTDPKVVE LCKNYLVVIA ISYPLTALSM VISAGARAVR
NPKLGMFCSG ASLIINIIFN YCLIFGIGIF PELGVKGAAI STVFARIIEC LLLVGYVILK
DKDYIIKFNI NDIRGINKDF FKVYMSKGMP IFINDFAWAI GSVSYSVAYA MVGTSAIAAS
QIATSTANLF IMLAMCIATG AAIMLGNELG ADNTDRAIDY SNKFSKIVFV VGSILGGMLI
LSIPILLKVY STSSTMAGDL SKIFVIMGVL MGLKSFNILV IVGILRSGGD TKYAFALEFG
CMWLVSIPLT FFGAINGFPI YMLVLFTYSE EIVKAIFGLP RVLSKVWVVN LTKDIEISG
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