| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0327 |
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| Symbol | recQ |
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| ID | 4202827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 390072 |
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| End bp | 392246 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081214 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_694787 |
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| Protein GI | 110799107 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.946569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGAG CGAAAGAGAT TTTAAAAAGT TTTTACGGAT ATAGTGAGTT TAGAAAAGGA
CAAGAGGAAA TAATAAATGA GATTATAAGT GGAAATGATG TTGTAGCTAT AATGCCAACT
GGTGGAGGAA AATCAATTTG TTATCAAATT CCTGCATTGA TTTTAGAGGG GGTTACAGTT
GTAATTTCAC CACTTATTTC TCTTATGAAA GACCAAGTTG ATGCCATAAA TAGCATGGGA
ATAGAGTCAG CATATATAAA TTCAACTCTT AGTAATGAAG AGATAAATAA TATATTTCAA
AGTGTTAAAG ATGGACATAT AAAAATATTA TATGTAGCAC CTGAAAGACT TGAATCTATG
GAGTTTTTAA ATTTAGTTTC TAATATAGAT ATTTCACAGG TGGCTGTTGA TGAGGCTCAT
TGCGTTTCTC AATGGGGGCA TGATTTTAGA AGTAGTTATA AATTTATTGG AAGGTTTATA
AATCTTTTAA GAAAAAGACC TGTAGTTTCA GCCTTTACAG CAACTGCAAC AGAGGAAGTT
AGAAAAGATA TTGTAAAATT ACTTGAGCTT AATAATCCAA AGGTTTTTGT TTCTGGATTT
GATAGGGATA ATTTAAAAAT AATAATAGAA AAGGGAGTTA ACAAGGCTCA CTATATATTA
GATTATTTAA AAGAAAATAA GGATGTTTCT GGAATTATTT ATTGTGCTAC TAGAAAAGAG
GTAGATTCCT TATGTGAGCT TATAAATTCA AGAGGAATAG GATGCACAAA ATATCATGCT
GGACTTTCAG ATGAGGAAAG AAAGAAAAAT CAAGAGGATT TTGTTTTCGA TAAGGTAAGT
GTAATGGTTG CTACTAATGC CTTTGGAATG GGTATAGATA AGCCAAATAT AAGATATGTA
ATTCACAATA ATATGCCTAA AAACATAGAG GGATATTATC AGGAAATAGG AAGAGCGGGA
AGAGATGGAG AGAAATCAGA GTGTATTCTT ATTTTTTCAC CAGGAGATGT TCAGACACAG
AAATATATAA TAGAAACTGG AACCTTAAAT CCTGAAAGAA AGATAAATGA ATTAAGTAAG
TTACAAACAA TGATGGATTT AGTTTATTCT AATGGATGTT ATAGAAGATT TATACTTAAT
TATTTTGGAG AAGACTTAGA GGAAGACTGT CATAATTGTA GCAATTGTGA AATGGAAGGA
GAATTAGTTG ATAAAACAAT AGATGCTCAA AAAGTTATTT CCTGTGTTTA TAGGATGAAA
AGACCCTTTG GAATAGGAGT AATAATAGAT GTTTTAAGGG CCTCAAAAAA TAAGAAGATA
ATTGAATTAG GCTTAGATCA GCTAAGTACT TATGGAATAA TGAAGGATTA TTCTAAAGAA
GGGCTTAAGG ACTTTATAAA CACTCTAATT TCGCATAGAT ATATAGATTA TATAGGGGAG
TACCCTGTAG TTAGACTTAA TCAAAGTTCC ATAGATATTC TTAAGGGTAA TGAAAAAGTT
ATGTTTAAGG AAAAGATAAA AGCTAAGAGA GTATCTAAAA ATAATGAATT GTTTGATTTA
TTAAGAAGCT TAAGAAGAGA AATTGCTTTA GAAGAAGGGG TGCCTCCATA TATAGTATTT
GGTGATAATA CACTTAAAGA GATGAGTGTA AGAATACCAG TAAATGAGAG CCAACTTTCA
GAAATAAGTG GTGTTGGTGA AAAGAAAATA CTTAAGTATG GAGAGCAGTT CTTAAATGTA
ATAAAGGAAT ATGTTAAAGT GAACAATATT GAGGTTCAAT GGGAATCTGG ATTAAAAATT
AATAAGGATG AGCTAGAAGA AAAGTTTAAA AAAGGTAATG GTAAAGATGG AAAGAAAAAG
TCTTTTGAAA TTACTATAGA TATGCTTAGA GAAGGGGATA AGTTTCATAC TATTGCAAAG
GAAAGAGAAC TTTCTATTAC TACAGTGCTT TCTCATATTC AGCAATATTT AGAAGAGGGA
AATAAAATAG ACTTTGAAAT AGATTTTGAT TCCTTATTTT CAAAAAGAGA AGAAGAATTG
GTTTTAGATG CCATAGATAA GGTTGGGTAT AGCAAGTTAA AACCTATTAA GGAAAATCTA
GAAGAGGATG TTTCCTATGA AAAAATAAGG TTTATAGTTA CTAAATTAAC TATAAATAAT
TTAAGAAAAG AATAA
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| Protein sequence | MKRAKEILKS FYGYSEFRKG QEEIINEIIS GNDVVAIMPT GGGKSICYQI PALILEGVTV
VISPLISLMK DQVDAINSMG IESAYINSTL SNEEINNIFQ SVKDGHIKIL YVAPERLESM
EFLNLVSNID ISQVAVDEAH CVSQWGHDFR SSYKFIGRFI NLLRKRPVVS AFTATATEEV
RKDIVKLLEL NNPKVFVSGF DRDNLKIIIE KGVNKAHYIL DYLKENKDVS GIIYCATRKE
VDSLCELINS RGIGCTKYHA GLSDEERKKN QEDFVFDKVS VMVATNAFGM GIDKPNIRYV
IHNNMPKNIE GYYQEIGRAG RDGEKSECIL IFSPGDVQTQ KYIIETGTLN PERKINELSK
LQTMMDLVYS NGCYRRFILN YFGEDLEEDC HNCSNCEMEG ELVDKTIDAQ KVISCVYRMK
RPFGIGVIID VLRASKNKKI IELGLDQLST YGIMKDYSKE GLKDFINTLI SHRYIDYIGE
YPVVRLNQSS IDILKGNEKV MFKEKIKAKR VSKNNELFDL LRSLRREIAL EEGVPPYIVF
GDNTLKEMSV RIPVNESQLS EISGVGEKKI LKYGEQFLNV IKEYVKVNNI EVQWESGLKI
NKDELEEKFK KGNGKDGKKK SFEITIDMLR EGDKFHTIAK ERELSITTVL SHIQQYLEEG
NKIDFEIDFD SLFSKREEEL VLDAIDKVGY SKLKPIKENL EEDVSYEKIR FIVTKLTINN
LRKE
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