Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0321 |
Symbol | |
ID | 4201636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 381297 |
End bp | 382679 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638081208 |
Product | amino acid permease family protein |
Protein accession | YP_694781 |
Protein GI | 110801135 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0838341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATTT TTAAAAAGCA AAGCTTAAAA AGAATACTTA GCGAAGCAAA TGAAAATAAG GAAAGAACCC TAAGTGCTTT GGATTTAACA CTAATGAGTG TTGGGTCAGT AATTGGTACT GGAGTTATGG TTTTAACTGG GATTGTTGCA GCTAAACAGT CTGGGCCAGC TACCTCCATA GCATTTATTG GAGGAGGAAT TGCGGCGGCT ATAATTGTTT TATGCTATGC AGAATTTAGT TCAAGTATTC CAAGTGCTGG AGGGTCTTAT TCATTTACTT ATGTCTCCTT AGGTGAGATT ATTGCATATA TATCAGGATT GTGCATTGTT ATTGGATATA CATTATCTAC AGCTACAGTA GCATCGGGAT GGGGATCTTA TCTTTTAAGT CTTTTAGATA TTCTAGGAAT AAAATTACCA AAGACATTTA CAGCTATTCC AAGTGAAGGG GGAATAGTAA ATCTACCAGC AATGATATCA ATTTTATTTA TAGTTTTTGT AATATCTTTA GGTACTAAAG AAAGTAAGAA GGTTAATGAT ATTATGGTAT TTATAAAGAT TGCAGTTATT GCTTTATTCA TAGGAGTTGG AGTTTTTCAT GTAAATACTA GTAATTGGCA TCCATTTGCT CCCTTTGGAG TTAAGGGTAT AGTCACTGGA ACAGCTTCTT TATTCTTTGC TTATTGTGGA TTTGATGCAA CGGCCTCAGC TGCTGAAGAG GTTAAAAATC CACAAAAATC TTTACCATTA GGTCTTATAA GTTCTTTAGT AATATGCACA ATTATATACA TAGCTGTCTC CTTAGTCTTA ACAGGAGTAA CCTCATATAC TAATTTAAAT GTTGGTGATG CATTATCCTA TGCTTTAAAA TTAGTAGGGC AAAGGGGAGT TGCCTTTGTA GTATCCTTAG GAACTGTAAT AGGAATCCTT GCCGTAATAT TTGCAGGTAA CTTTACAACA TCACACATAC TTTTAGCCAT GAGTAGAGAT GGATTATTAC CAAAATTCTT TAGTAAAGTT GATAAAAAAG ATGTGCCATA TACAGCATTA TGGACTGTTG GTATAATAGG TGCCTTATTA GCAGGATTTT TTAATCTAGG ACAGTTAGCT AACTTTGCTA ATATAGCCTT TTTATTAACA TATACTTTAG TTTGTATATC TTTAATAGCC TTTAGAAAAA AATATCCTCA TGTAAAAAGA GGGTTTAAAA CTCCATTGGT ACCATTTATT CCTTTACTAG GGGCATTTAG TTGCTTATTT TTAATGAGTA ATTTATCAGA AGAAATATGG AAAATATTTA TTGTGGTTTT AGTTTTATTA ATCATAAGTT ACTTAGTTTA TGGAAGAAAG CATTCATTAA TCAATAAAAA CAATGATAAT TAA
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Protein sequence | MEIFKKQSLK RILSEANENK ERTLSALDLT LMSVGSVIGT GVMVLTGIVA AKQSGPATSI AFIGGGIAAA IIVLCYAEFS SSIPSAGGSY SFTYVSLGEI IAYISGLCIV IGYTLSTATV ASGWGSYLLS LLDILGIKLP KTFTAIPSEG GIVNLPAMIS ILFIVFVISL GTKESKKVND IMVFIKIAVI ALFIGVGVFH VNTSNWHPFA PFGVKGIVTG TASLFFAYCG FDATASAAEE VKNPQKSLPL GLISSLVICT IIYIAVSLVL TGVTSYTNLN VGDALSYALK LVGQRGVAFV VSLGTVIGIL AVIFAGNFTT SHILLAMSRD GLLPKFFSKV DKKDVPYTAL WTVGIIGALL AGFFNLGQLA NFANIAFLLT YTLVCISLIA FRKKYPHVKR GFKTPLVPFI PLLGAFSCLF LMSNLSEEIW KIFIVVLVLL IISYLVYGRK HSLINKNNDN
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