Gene CPF_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0320 
Symbol 
ID4201114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp380174 
End bp381106 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content27% 
IMG OID638081207 
Producthypothetical protein 
Protein accessionYP_694780 
Protein GI110798991 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATA AGCAGAAGGG AATAAGTCTA GTTTTAATAG CGACAGTTTT TTGGGGCATA 
ATGGGCATAA GCAGTAGAAT CCTATATGAA GCGGGATTAA GCACAATGTT TATAGCTTTT
AGTAGAAGTT TTTTATCTTC TATTTGCTTT TTTATTTGGA TAATGATAAC TGATAGAAAA
ATTTTAAAGA TAGATCCAAG AGGCTTAGCT ATTTCAGCAT TATATGGAAT AGGAACTTTT
GCCTTATGTT TTATTGGATA TAACTTGTCC GTAGAATATA TACCTATATC TGTAGCTACA
GTATTGATGT TTACTAACTC AATATGGGTA ACAATCTTTG GGGTATTATT CTTTGGTGAA
AAGTTCAATA TGAAAAAGGG ATCTGTTATC CTATTAACTT TAGTAGGATG CATAATGGTT
TCAAATATGT CTTTAGGACA TTTTAATATG AGTGCAATAG GAATAGCTGC TGGATTAGGA
ACAGGATTTT TATTTGCTTT TCAAATAATA TTTCCTAAAT TTTTTAGTGG TTATAGAAAA
GACACATTGC TTATTTATGG CTATATATTT GCAAGTATAT TTATAGGTTT ATTTACAGAT
TTTAAAGAAT CATTTGATAT AATTGCAAAT GCACCTAATA TTGGGGTGGT CATATTAAAT
ATATTATCTA TAGGTATTTT AAGTACATTT ATATCTAATA CATTCTATAT AAAATCAACT
GAATACATAG AGGCTAGTGT TACTAGTATA TTAGCTTCTA TGGAACCAGT ACTATCAAGT
ATATTTGCTT TCTTTATTTT TGGAGAAGTA TTAAATGGTA AGCAAATAGT TGGTGCTATA
TTAATAATTA TAGCTGCCAT AATATTAGAG TTGAAATTAG ATAAAGAAAG AATAAACAAT
GTATTTAAGT TGAAATTTAT AAATCAAAAT TAA
 
Protein sequence
MNNKQKGISL VLIATVFWGI MGISSRILYE AGLSTMFIAF SRSFLSSICF FIWIMITDRK 
ILKIDPRGLA ISALYGIGTF ALCFIGYNLS VEYIPISVAT VLMFTNSIWV TIFGVLFFGE
KFNMKKGSVI LLTLVGCIMV SNMSLGHFNM SAIGIAAGLG TGFLFAFQII FPKFFSGYRK
DTLLIYGYIF ASIFIGLFTD FKESFDIIAN APNIGVVILN ILSIGILSTF ISNTFYIKST
EYIEASVTSI LASMEPVLSS IFAFFIFGEV LNGKQIVGAI LIIIAAIILE LKLDKERINN
VFKLKFINQN