Gene CPF_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0318 
Symbol 
ID4203446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp377759 
End bp378556 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content37% 
IMG OID638081205 
Producthypothetical protein 
Protein accessionYP_694778 
Protein GI110799859 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAC ATGAAATTGA CTTTGAACTT TTTGGAGATG ATATGCAATT TGTAGAGATT 
GAATTAGATC CAAGAGAAAC TGTTGTTGCC GAGGCTGGAG CAATGATGAT GATGGATAGT
AGCATAGAAA TGGAAACTAT TTTTGGTGAT GGAAGCAATA GTAGTGGATC AGGTGGATTT
TTTGGAAAGT TAGGAGGAGC TGCTAAGAGG GTTTTAACAG GTGAAAGCTT ATTTATGACT
GCCTTTACCA ATATGGGAGT AGGAAGAGAA AAGGTTGCCT TTGCTTCACC ATATCCAGGA
AAGATAATTC CAGTAGATTT AAGAAATTAT GGTGGTAAAC TTATATGCCA AAAGGATGCT
TTTTTATGTG CAGCTAAGGG AGTAAGTATA GGAATTGATT TTAGAAGAAA ATTAGGAACT
GGGTTCTTTG GTGGAGAAGG CTTTATACTT CAAAAACTTG AAGGGGATGG TATGGCCTTT
ATTCATGCTG GTGGTACTAT TATTAGAAAG AGACTTCTAC CAGGACAAAA ATTAAAAGTG
GATACAGGAT GCTTAGTTGC TATGACAAAG GATGTAAATT ATGATATAGA GTATGTTAAG
GGAATAAAGA ATGCTGTCTT TGGAGGAGAA GGGATTTTCT TTGCAAGTTT AGTAGGGCCA
GGAGAAGTTT GGATTCAAAG CTTACCATTT AGTAGACTTG CATCTAAGGT TGTTTCATCT
GCACCTCAAG TTCCAGGATC TAGAGATGTT GGGGAAGGTA GCGTATTAGG AGAGTTTGGA
CGATTATTCC AAGACTAG
 
Protein sequence
MNSHEIDFEL FGDDMQFVEI ELDPRETVVA EAGAMMMMDS SIEMETIFGD GSNSSGSGGF 
FGKLGGAAKR VLTGESLFMT AFTNMGVGRE KVAFASPYPG KIIPVDLRNY GGKLICQKDA
FLCAAKGVSI GIDFRRKLGT GFFGGEGFIL QKLEGDGMAF IHAGGTIIRK RLLPGQKLKV
DTGCLVAMTK DVNYDIEYVK GIKNAVFGGE GIFFASLVGP GEVWIQSLPF SRLASKVVSS
APQVPGSRDV GEGSVLGEFG RLFQD