Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0317 |
Symbol | |
ID | 4203013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 374562 |
End bp | 377219 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081204 |
Product | cation-transporting ATPase, P-type |
Protein accession | YP_694777 |
Protein GI | 110801417 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAG TTTATTCAAA ATCAAAAGAA GAACTTTTTA AAGAACTCGG TGTAAACAAG GACGGTTTAA ATGACACTGA GGTTAAAAGC ATGGAAGAAA AATATGGTAA AAATGAATTA GTTGAAGGTA AGAAAAAATC TACTTTCCAA GTATTTCTTG ATCAATTTAA GGACATGCTA ATAATAATTC TTATATGTGC TGCCGCTATT TCAATGTTTT TAGGAGATAT TGAAAGTGCC TCTGTTATCA TATTCGTATT AATAGTAAAT GCTACTCTTG GAACTATTCA GCATCTTAAA GCTGAACAAT CATTAAGTAG CTTAAAAGCT CTCTCCTCAC CTTCTACTAA GGTGCTTAGA AATGGTGAAA GAATAGAAAT AGACTCAAAG GATGTAGTTG TTGGAGATAT TATCTTTCTT GAAGCTGGAG ACTATGTTCC TGCTGATGGT AGAATTCTTG AAAACTATAG CTTACAAGTT AATGAAAGCT CATTAACAGG AGAATCTGAA AGCATAGTTA AAATGTCTGA AATAATAAAA GGAGAAGAAA TTCCTATTGG TGATAGAAAA AATATGGTCT TCTCTGGAAG CTTAGTAACT TATGGTAGAG CTACTATTTT AGCAACAGCC GTTGGTATGG ATACTGAAAT AGGTAAAATA GCTCAGTTAT TAAATGATAC TAAGGAAAAG AAGACTCCTC TTCAAGCTAA CTTAGATAAC TTTGGTAAAA AGCTTGCAAT TGGAATACTT GTTATCTGTG CAATAGTATT TGCTCTTAGT CTTTATAGAG GTGAAGCTAT TATAGATGCA TTCATGTTTG CAGTTGCCTT AGCAGTAGCT GCTATCCCAG AAGCTTTAAG TTCTATAGTA ACAATAGTTC TTTCTTTAGG AACTCAAAAA ATGGCTAAAG AAAATGCCAT CATAAGAAAA TTACAAGCAG TTGAAGGCTT AGGTAGTGTA TCTATTATAT GTTCAGATAA AACTGGTACA TTAACTCAAA ATAAAATGAC CGTTAAAAAG ATTTTTGTTG ATGGAAAAGT AATAGATTCA AATGAATTAA ATTTAGAAAA GAAAATAGAT AATGATTTAT TAACTATGAG TTTACTTTGT AATGATGCAA TTACAGATTG CGAAAAAGAA ATAGGTGATC CAACTGAGGT TGCCCTTGTA AACTTAGGTG ATTTATACGG AGTAGATGAA CTTGTTCAAA GGGATAAATT TAAAAGACTT GGTGAAATTC CTTTTGATTC AGATAGAAAA CTTATGAGTG TTGTTTATAA CATTCATGGT GAAAATATTA TAGCTACTAA GGGAGCTGTT GATGTTCTTC TTAAAAGATC TACTAAGATT GAAACTTCTG AAGGGGTTAG ACCTATAACT AAAGAATATA TAGCTAAAAT AGAAGAAATT AACCAAGAAT TCTCAAAAAC AGGTCTTAGA GTTTTATCTT TTGCATATAG AAATATTGAA AGTAGAACAG ATATAAAACT TGATGATGAA AATGACTTAA CCTTCATAGG TCTTATATCA ATGATGGACC CACCAAGAGA AGAATCTGCT GAAGCCGTAA GAGCTTGTAT AGAAGCTGGA ATTAAACCTG TAATGATAAC TGGTGACCAT AAAATAACAG CTTCTGCCAT AGCAAAACAA ATAGGTATAT TAAAAGATGA AAGTGAAGCT ATTGAAGGTT CTGCTTTAGA TAAAGTTAGT GACGAAGAAC TTAAGAATAT GGTAGAACAC ATTTCAGTAT ATGCTAGGGT TTCTCCAGAG CATAAAATAA GAATAGTTAG AGCATGGCAA GAAAAAGGCA ATGTAGTTGC CATGACTGGT GATGGTGTCA ATGACGCCCC TGCTTTAAAA CAAGCTGATA TAGGTGTTGC AATGGGTATT ACAGGATCTG AAGTTGCTAA AGATGCCGCT TCTATGGTCT TAACAGATGA TAACTTTGCA ACCATAGTAA AAGCTATTGA AAATGGTAGA AATATTTACT CAAATATTAA AAATGCTATT AAATTCTTAT TATCTGGTAA TACTGCTGGT ATATTATCAG TATTATATGC TTCCATATTA GCATTACCAG TTCCATTTGC TGCGGTACAC TTATTATTTA TAAACCTTTT AACTGATAGT TTACCTGCAA TTGCTTTAGG TCTTGAACCT CATAAAAAAG AAGTTATGAA AGAAAAACCA AGAAAAGCTA ATGCTTCTAT ATTAACAAAA GACTTCATTA CAGATGTATT ATTTGAAGGT GTAGTTATTA CTATTGTTAC TATGATAGCC TTCCATATTG GATTAAACCA AGGTGGACCT CTATTAGCAA GTACAATGGC CTTTGCTACT TTATGTTTAT CAAGACTTGT TCACGGATTT AACAGTAAAT CTAAAAAACA TGTAGTATCA AAAGAATTAT TCTCTAATAA ATATTTATGG GCTGCATTTG GTGTAGGATT TGTACTATTA AACATTGTTC TTTTAGTACC TGCATTTGAA GGATTATTCC AAGTTGCTCC ACTTACACTT AATAACTTAT TAACTATATA TGGATTATCA TTATGTACTT TCATAGTTGT TCAATTTGTT AAATTTATAA GAGAAAAATT TACTGAAAAT AAAACAAACA CTGTTCAAGA ATCAAATAAA GAAAATAGAG CAGCTTAA
|
Protein sequence | MKKVYSKSKE ELFKELGVNK DGLNDTEVKS MEEKYGKNEL VEGKKKSTFQ VFLDQFKDML IIILICAAAI SMFLGDIESA SVIIFVLIVN ATLGTIQHLK AEQSLSSLKA LSSPSTKVLR NGERIEIDSK DVVVGDIIFL EAGDYVPADG RILENYSLQV NESSLTGESE SIVKMSEIIK GEEIPIGDRK NMVFSGSLVT YGRATILATA VGMDTEIGKI AQLLNDTKEK KTPLQANLDN FGKKLAIGIL VICAIVFALS LYRGEAIIDA FMFAVALAVA AIPEALSSIV TIVLSLGTQK MAKENAIIRK LQAVEGLGSV SIICSDKTGT LTQNKMTVKK IFVDGKVIDS NELNLEKKID NDLLTMSLLC NDAITDCEKE IGDPTEVALV NLGDLYGVDE LVQRDKFKRL GEIPFDSDRK LMSVVYNIHG ENIIATKGAV DVLLKRSTKI ETSEGVRPIT KEYIAKIEEI NQEFSKTGLR VLSFAYRNIE SRTDIKLDDE NDLTFIGLIS MMDPPREESA EAVRACIEAG IKPVMITGDH KITASAIAKQ IGILKDESEA IEGSALDKVS DEELKNMVEH ISVYARVSPE HKIRIVRAWQ EKGNVVAMTG DGVNDAPALK QADIGVAMGI TGSEVAKDAA SMVLTDDNFA TIVKAIENGR NIYSNIKNAI KFLLSGNTAG ILSVLYASIL ALPVPFAAVH LLFINLLTDS LPAIALGLEP HKKEVMKEKP RKANASILTK DFITDVLFEG VVITIVTMIA FHIGLNQGGP LLASTMAFAT LCLSRLVHGF NSKSKKHVVS KELFSNKYLW AAFGVGFVLL NIVLLVPAFE GLFQVAPLTL NNLLTIYGLS LCTFIVVQFV KFIREKFTEN KTNTVQESNK ENRAA
|
| |