Gene CPF_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0306 
Symbol 
ID4201334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp364316 
End bp365002 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content30% 
IMG OID638081193 
ProductFCD domain-containing protein 
Protein accessionYP_694766 
Protein GI261876163 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.438434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC CAGTTAAAAA CATGAAAGTT TATGAGCAGG TTGTTGATCA AATAAAAGAA 
ATGGTTAGAG TAGGACAGAT AAAAAAAGGA GATAAGCTTC CTACAGAGAG AGTTATGGCA 
GAAGAGCTTC AAGTAAGTAG AACTTCTATA AGAGAAGCCA TGAGAGCTTT AGAGGTTGTA 
GGATTAATAG AAAGTAGACA GGGAGCAGGT AATTATATAA GAGAAGAGTT TGATGATGTA 
TTATTAGAAC CGCTTTCAAT AGTATTTATG CTTCAAAATG GAACAAATAA AGATATATTT 
GAATTAAGAG AAGTTTTAGA ATTGTCTACT ATATTTTTAT CTGTAATGAG AATATCTGAT 
GAAGAATTAA AAAAGCTTGG TGAACTTGTG GAGAGGTTTA AGACATCTAG AGATGAAGAA 
GAGAATGTTA AAATTGATAG CGAATTTCAC AGCATAATTG TTAAAGGAGC AAATAATGTA 
CTTATAACTA ATTTGTTAGA AGGGGTATCT GAGTTAGTTG ATAAGTTTAT AAGTGAAGGA 
AGAAGAGCTA TTTTAAGTGA TGAGAGAAAT AGAGGAAAGC TATTAGATTT TCATGAAAAA 
ATATATTTAG CTATAAAAAA TAGAGATGCT TATTCTGCAT ATAAACATAT GCAAGAGCAT 
TTCCAATTAA TAAAGGAAAA TATTTAG
 
Protein sequence
MFKPVKNMKV YEQVVDQIKE MVRVGQIKKG DKLPTERVMA EELQVSRTSI REAMRALEVV 
GLIESRQGAG NYIREEFDDV LLEPLSIVFM LQNGTNKDIF ELREVLELST IFLSVMRISD 
EELKKLGELV ERFKTSRDEE ENVKIDSEFH SIIVKGANNV LITNLLEGVS ELVDKFISEG 
RRAILSDERN RGKLLDFHEK IYLAIKNRDA YSAYKHMQEH FQLIKENI