Gene CPF_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0293 
Symbol 
ID4203226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp349120 
End bp350064 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content34% 
IMG OID638081180 
Productputative transketolase, C-terminal subunit 
Protein accessionYP_694753 
Protein GI110801343 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3958] Transketolase, C-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA AAATAGCAAC TAGAGAAGCA TACGGAAAAG CATTAGCTGC TTTAGCTAAC 
GAAAATAAGA ACATAGTAGT TTTAGACGCA GACCTTTCAA AATCAACTAA AACTGCTGAT
TTCAAAAAAG CATGTCCAGA AAGATTCATA AATATGGGTA TTGCAGAAGG AAATATGATG
TCAGTAGCAG CAGGTTTATC AACTTGTGGA AAAATTCCAT TTGCTAGTAC ATTTGCTATG
TTTGCTGCTG GAAGAGCATT TGAGCAAATA AGAAACTCAA TATGTTACCC AAGATTAAAT
GTAAAAATAT GTGCTACTCA TGCTGGTTTA ACAGTTGGTG AAGATGGAGC ATCACACCAA
GCTATAGAAG ATTTATCTTT AATGAGAAGT ATACCAAACA TGACAGTAAT ATGCCCATCA
GATGCAGTTG AAACAGAAGC TGCAATAAGA GCTATTGCTG AATACAATGG ACCTTGCTAT
GTAAGATTAG GAAGAGCAGG AGTTAATGTA ATAAATGATA GACCAGAGTA CAAATTTGAA
ATTGGAAAAG GTATAGAATT AAAAGAAGGT AATGATGTAA CATTATTTGC AACAGGTATA
ATGGTTGATG TAGCTATAGA AGCTGTTGAA GCTTTAGCTA AAGAAGGAAT TAACGCTAGA
TTAATAAACA TTCATACTAT TAAACCAATA GATTCAGAGC TTATATTAAA AGCTGCTAAA
GAAACTGGAG CAATAGTTAC ATTAGAAGAG CATAATATAA TCGGAGGATT AGGATCAGCT
GTAGCTGAGG TTGTTGGAGG AGAATATCCA GTACCAGTAG TTAGAGTTGG TGTTAAAGAT
ACATTCGGAG AAAGTGGTAA ACCAGACCAA TTATTAAAGG CTTATGGATT AACTTCAGAA
GAAGCAGTTA AGGCTGCTAA GAAAGCAATG AGCTTAAAAA GATAA
 
Protein sequence
MAKKIATREA YGKALAALAN ENKNIVVLDA DLSKSTKTAD FKKACPERFI NMGIAEGNMM 
SVAAGLSTCG KIPFASTFAM FAAGRAFEQI RNSICYPRLN VKICATHAGL TVGEDGASHQ
AIEDLSLMRS IPNMTVICPS DAVETEAAIR AIAEYNGPCY VRLGRAGVNV INDRPEYKFE
IGKGIELKEG NDVTLFATGI MVDVAIEAVE ALAKEGINAR LINIHTIKPI DSELILKAAK
ETGAIVTLEE HNIIGGLGSA VAEVVGGEYP VPVVRVGVKD TFGESGKPDQ LLKAYGLTSE
EAVKAAKKAM SLKR