| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0275 |
|---|
| Symbol | |
|---|
| ID | 4203552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 330533 |
|---|
| End bp | 331282 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638081162 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_694735 |
|---|
| Protein GI | 110800155 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4123] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.343318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATTTAA CTTTAGTTAA CGAAAATGAA ACTCTTGATG ATCTACAGTT AGATGGATTA
CATCTAATTC AGAAAAAAGA AGGGTTTAGA TTTGGAGTGG ATGCTGTTTT ACTAGCTAAT
TTTGCTAATG TTAACAGAAA ACATTCTGTA TTAGATTTGT GCACAGGTAC AGGAATAATT
CCTTTTATTA TTTACGGAAA AAAAAATCCT AAAGAAGTAG TTGGAATTGA GATACAAGAA
GAATTTGCTG AAATGGCAAA TAGAAGTGCA AAGATTAATA ATATTGAAGA TAAAGTATCT
TTTGTATGTG GCGATTTAAA GGATAAAGAG CTTAATAAAT TAATGCCTAA ATTTGATGTT
GTTACAGTAA ATCCTCCATA TAAGTTAAAT AATGCAGGTA TTGTAAATCC AGAAGATAAA
CTTGCTATAG CTAGACATGA GATTATGTGT AATTTAGAGG ATGTTATAGC AGTAAGTAGA
AGATTTCTAA AGGATAATGG AAGACTTTAT ATGGTACATA GACCTGAAAG GTTAGCTGAT
ATATTTTGTC TTATGAGAAA ATATAAAATA GAGCCTAAAA GGGTTAGAAT GGTTCATCCT
AATACAAAAA AAGCTGCAAA CATAGTTTTA GTAGAAGGTC AAAGAGACGG CGGAGCTTTC
TTAAAATGGG AAGCACCTTT ATATGTGTAT AAAGATGAAG GTGGATATAG TGAAGAAATA
GATAAGATAT ATGGAAGGGA GAGTAAATAA
|
|---|
| Protein sequence | MDLTLVNENE TLDDLQLDGL HLIQKKEGFR FGVDAVLLAN FANVNRKHSV LDLCTGTGII
PFIIYGKKNP KEVVGIEIQE EFAEMANRSA KINNIEDKVS FVCGDLKDKE LNKLMPKFDV
VTVNPPYKLN NAGIVNPEDK LAIARHEIMC NLEDVIAVSR RFLKDNGRLY MVHRPERLAD
IFCLMRKYKI EPKRVRMVHP NTKKAANIVL VEGQRDGGAF LKWEAPLYVY KDEGGYSEEI
DKIYGRESK
|
|---|
| |