Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0270 |
Symbol | |
ID | 4203449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 326518 |
End bp | 327867 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638081157 |
Product | [Fe] hydrogenase |
Protein accession | YP_694731 |
Protein GI | 110799862 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AGTATGACTC TTTATTTAAA GAACTTATCT CTTCATATTA TTCAGAAGAT AACTTTGATG AAAAATTAAA TGATATAGTA AAAAATAATT TTAATAGTAA AGAAGATGCT ATTGATGTTC TTTCATCCCT ATGTGGAGTT GATATAGATA AAAACTCAGA TAATATTGCT TATGACATAA GAAAAGCTAT AACAACACAC AAAATCAAAA AAAATATAGT TGATAAAGTT TCTGTATGTA CAAAAAACTG TTCAAAAGAA AGTAAAGGTA AATGTCAAAG CCTTTGTCCA TTTGATGCAA TACTGACTGA TCCTATAGAT AATAGTAAAT ATATAGATCC AAATCTATGT CAAAATTGTG GTATATGTGT TCAGGTATGC GAAAGTGGTC ACTTCTTAGA TAGAATTGAA CTTCTTCCTA TTATTGATTT AATAAAAAAT AATGAGACTG TAATTGCCGC AGTAGCTCCT GCTATAGCTG GACAATTTGG TGAAAATGTC TCCTTAGATA TGCTAAGAGA AGCATTTATA AAAATAGGCT TCTCAGATAT GATTGAAGTT GCATTTGCCG CTGATATGCT TTCAATTAAA GAAGCTGTTG AATTTAATCA TCATGTAGAA AAAACTGGAG ATATATTAAT AACATCTTGC TGTTGCCCTA TGTGGGTAGC CATGTTAAGA AAGTGTTATA AGGATTTAGT AAAGGATGTC TCCCCTTCTG TTTCACCTAT GATAGCTGCT GGGAGAGTAA TAAAAAAATT AAATAAAGAT GCTAAGGTAG TTTTTATAGG TCCCTGTATA GCTAAGAAAG CTGAAGCAAG AGAAAAAGAC TTAGTTGGTG CCATAGATTA TGTCTTAACC TTTGAAGAAT TAAAAGGCAT ATTTGAAGCA TTAAAAATAG ATCCATCGTC TATGAAAGGT GTTCCCTCTA TAGAATACAC CTCTAGAGGT GGAAGGCTTT ACGCTCGAAC TGGAGGGGTA TCAGAGGCCA TAAATGATGT GGTTAAAGAA CTCTATCCTG ATAAAGCTAA GATATTTAAG GCAGTTCAAG CTAATGGAGT TAAAGAATGT AAAGAACTCT TAAATAAAGT TCAATCTGGT GAATTAAAAG CAAACTTTAT TGAAGGTATG GGATGTGTTG GAGGATGCGT TGGTGGTCCC AAAAGAATAG TAGATCCTAG CATAGGTAAA AAACACGTTG ATGAAGTTGC TTATAATTCT CCAATAAAAG TTGCTACTCA TAGCCATACT ATGGATGAAG TCCTATTAAG ATTAGGAATA AATTCATTAA AGTCTTTTGA GGATAAAGAA AAAATATCTA TTTTTGAAAG AGAATTCTAA
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Protein sequence | MNKKYDSLFK ELISSYYSED NFDEKLNDIV KNNFNSKEDA IDVLSSLCGV DIDKNSDNIA YDIRKAITTH KIKKNIVDKV SVCTKNCSKE SKGKCQSLCP FDAILTDPID NSKYIDPNLC QNCGICVQVC ESGHFLDRIE LLPIIDLIKN NETVIAAVAP AIAGQFGENV SLDMLREAFI KIGFSDMIEV AFAADMLSIK EAVEFNHHVE KTGDILITSC CCPMWVAMLR KCYKDLVKDV SPSVSPMIAA GRVIKKLNKD AKVVFIGPCI AKKAEAREKD LVGAIDYVLT FEELKGIFEA LKIDPSSMKG VPSIEYTSRG GRLYARTGGV SEAINDVVKE LYPDKAKIFK AVQANGVKEC KELLNKVQSG ELKANFIEGM GCVGGCVGGP KRIVDPSIGK KHVDEVAYNS PIKVATHSHT MDEVLLRLGI NSLKSFEDKE KISIFEREF
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