Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0263 |
Symbol | |
ID | 4202406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 318350 |
End bp | 319162 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081150 |
Product | ABC-2 type transporter, permease protein |
Protein accession | YP_694724 |
Protein GI | 110800101 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGATT GGCTTGAGAT TGAGAAAAGT ATTTTTTCTC ATTGGAGAAT GATATTTAGC ATATCCAAGA AAGAATTTAA AAAAGAGTTT GCTGGTTCTA AGTTAGGTAT GGCTTGGGCG ATAATAAGAC CACTAGCTAT GATAACTGTT TTCTGGATGA TATTTTCAAC TGGAATGAGA ACAACTAGTT CAAATGTACA GGTTAATTAT TTAGTTTGGC TAGTTTCAGC ATACATACCA TGGATATTTA TTTCTGATGT AATTATGTCA GGCGCAGGTT CCATAAGGGT TAATTCCTTT TTGGTTAAAA AGGTTAAATT CCCTGTAGAA ATATTACCTA CTATAAGAAT AGTAATTAGT TTTTACACAT TTTTAATTTT GCTAGTAATA AGTTTTATAA TATTTGCAGT CAATGGTAAC TTAAATCTAA TAAATATACC TAAATTGATT TATGCCATTA TCATAACTAT AATATTTTTG GCAGCTTTAT CAAGATTACT ATCTACATGG GTAGTAATGT CAATTGATAT ATTACATGGA ATATCTGTAT TTATGCAATT TTTATTCTGG ATGTGTCCAG TTATGTGGCA AGCAGGAGAA TTGCCTGTAG GTTCTAGTAT GCCTTGGATT GAGAAAATAC TAAAATTAAA CCCTTTATAT TACTTAGCTG TTTTATTTAG GGACGCATAT TTAGGAACAC ATACAGTTAG TTTAGCATAT GGAGTTTATT TCTGGGTAGT AACTATAATA TTATTCATAT TTGGATCTAA AGTATTTAAA AAATTTAGAC CAGAATTTGA TGATGTTTTA TAA
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Protein sequence | MKDWLEIEKS IFSHWRMIFS ISKKEFKKEF AGSKLGMAWA IIRPLAMITV FWMIFSTGMR TTSSNVQVNY LVWLVSAYIP WIFISDVIMS GAGSIRVNSF LVKKVKFPVE ILPTIRIVIS FYTFLILLVI SFIIFAVNGN LNLINIPKLI YAIIITIIFL AALSRLLSTW VVMSIDILHG ISVFMQFLFW MCPVMWQAGE LPVGSSMPWI EKILKLNPLY YLAVLFRDAY LGTHTVSLAY GVYFWVVTII LFIFGSKVFK KFRPEFDDVL
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