| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0259 |
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| Symbol | |
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| ID | 4200959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 307745 |
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| End bp | 310282 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638081143 |
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| Product | putative beta-N-acetylhexosaminidase |
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| Protein accession | YP_694721 |
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| Protein GI | 110798758 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTAA AGAAATTAGC TGCAATATTA ACTGTAGCCT CAATAGGTGC TACTATTTTT
ACTAGTAATA AAGAGGTTAT GGCAACTGAC TCTTATAGTA AGGCAAAAGA AATAGTTTCT
AACATGACTT TAGAAGAAAA GCTTGGTCAA ATGATAATGC CTGATTTTAG AATGTGGCAG
GAAGAAGGAG CTAAAGAACC AAGTGATTTA ACAGAAATAA ATAGTGAAGT TGCAGAGGTC
ATAGATAAAT ATGATTTAGG TGGAGTTATA CTTTTTGCTG AAAATGTTAA GGAGATATCT
CAGACAACTA CTTTAATACA TGATTTACAA GAGGTAGCTA TAAATGATGA AGATGGAAAT
TTACCATTAC TTATAACTTT AGATCAGGAG GGTGGAATAG TAACTAGGCT TGGAGAAGGA
ACTAACTTAC CTGGTAATAT GGCATTAGGT GCCACTAGAA GTGAAAAGTC TTCATATGAT
GCTGGTTACG TAATAGGAAA AGAATTAAAT GCTTTAGGAG TAAATGTAGA CTTTGCTCCA
GTTCTAGATA CAAATAATAA TCCGGAAAAT CCTGTTATAG GAGTAAGATC AATTTCTAGT
AATCCAGAAC TTGTAGGGAA GTTAGGAAAA AATATTGCTA AGGGTATTCA GGATCAAGGA
GTTGCTGCTA CTGCAAAACA TTTTCCAGGT CATGGTGATA CTGCAACGGA TTCACATTAT
GGTTTGCCAA TGGTAGATAA ATCTATTGAA GAACTCAGGG AAACAGAACT TAAACCATTT
AAAATAGCTA TAGAAAATGG TATAGATATG ATAATGACAG CTCATATACA ATTTCCTCAA
ATAGAGAAAG ATACTTTTAT ATCAAAAAAA GATGGAAGCC AAATATCAAT TCCAGCCACA
TTATCAGATG ATATTATAAA AGGAATTTTA AGAGAAGAAA TGGAGTATGA TGGTGTTGTA
ATAACTGATG CAATGAATAT GAAAGCTATA TCAGATCATT TTGGAGAATT AGAGTCAACA
AAAATGGCTA TAAATGCAGG GATAGATATT ATTCTTATGC CTACTATATT AAGAAATAAT
GAGGATGTTA AAAAATTAGA TTATATAGTA AATGGGATTT TAGACTCTAT TAAAAGTGGA
GAAATAAAAG AAGAGGAAAT AACTGATTCG GCTGAAAGAA TCGTTAAACT AAAAATAGAT
AGAGGAATAA TTGATTTAAA AAATAATAAT GCATCTTTAG AGGAAAAGAT TAAGAAAGCT
AAGAAAACTG TTGGATCTGT AGAAAATAGA AATATAGAAA GAAGGATTTC AGAGGAAGCA
ATTACTATTA CTAAAAATGA GGAGAATATA CTTCCACTAA ATCCTAAAGA AGGAGAAAAA
GTTTTACTAA TAGCGCCAAA TGAAAGTCAA ATTCATAGTA TGAAGTTTGG TATAAATAGA
CTTATACATG AAAATAGTTT AAATAATATT AAGTTAGACA CCTATGAGTA CAATAACATA
GGAATAATTG ATGATGTATT AAAAGAAAAA ATAGAAAGTT CTGATTATAT AATAGTGGCT
TCTCTGTCAA GTAATGCTAA CCACTTAAAG CCTGGGGCTT GGAATAGAGA TTTACCTAGG
TCAGTAATTG ATTATGGAAA TAAGTTGAAT AAAGATACTG TATTAATAAG TTTAAGAAAT
CCATATGATT TGGCAGCTTA TGATAACGCT AAGGCACAGG TAGTTGCATA TGGATTTAAA
GGAATGGATC CAACAGAAGG AGATACTTTG TTTCCAACTA AATCTTCAGG ACCTAATATA
CCAGCATCTA TGGGAGTTGT TTTTGGAGCT GTAGAGCCTA AGGGAAAGTT ACCAGTAGAT
ATTCCAAGTT TAAATAATGA TGGAACTATG AATACTGAAG TTAATTATTA CGATTATGGA
CATGGCATTA CAAACATCAA TAGCTTGGGA AATGTTAACA TTAGTATGAA TAAAAAAATA
AATTTAGGTG ATAATTTTCA AGTAAAGTTT AATTTAAGTG ATTTTAATGA AATAGTAGCA
GGTAAATATA GAGCCAAGAT TAAATTTCAA GGAGAAAAAT TAGAATTTAT TAATGGTAAG
GTAGAGTTTA GTGGAGATTT ACAAACTAAT ATTATAGATA ATAATACTTT AGAAGTTTTA
ATAAATTTAG AAGAGGGTTC TCTTAAGGCT AATGAAGTTA ATTTCATTTT AGAATTTAAG
GCAATTGATA AAGCTGAATT AACTAGCATA GAAATAACAA GTTCAGAACT TATTGATGAA
AAAGGAAGAT GTTTTAAACA GAAATATGTT ATTTCAGAAT TTTCGATAGA AGATAATAAA
GAGGATAAGC CTCTAAGCCC AGATGAGGAT AAAGAAGATG AAGAAAATAA TGAGGATTTA
GGTAATAGTG ATGATAATAA TAAAGATGAA TTACCACAAA CAGGTTCAGG TGTTGGTAAA
GAATTCATTT TTGGATTAGG GTCTCTATCA CTTTTAGCTG GAATTGGATT AAAAAGCAAA
AGATTTAAAA GAAAATAG
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| Protein sequence | MLLKKLAAIL TVASIGATIF TSNKEVMATD SYSKAKEIVS NMTLEEKLGQ MIMPDFRMWQ
EEGAKEPSDL TEINSEVAEV IDKYDLGGVI LFAENVKEIS QTTTLIHDLQ EVAINDEDGN
LPLLITLDQE GGIVTRLGEG TNLPGNMALG ATRSEKSSYD AGYVIGKELN ALGVNVDFAP
VLDTNNNPEN PVIGVRSISS NPELVGKLGK NIAKGIQDQG VAATAKHFPG HGDTATDSHY
GLPMVDKSIE ELRETELKPF KIAIENGIDM IMTAHIQFPQ IEKDTFISKK DGSQISIPAT
LSDDIIKGIL REEMEYDGVV ITDAMNMKAI SDHFGELEST KMAINAGIDI ILMPTILRNN
EDVKKLDYIV NGILDSIKSG EIKEEEITDS AERIVKLKID RGIIDLKNNN ASLEEKIKKA
KKTVGSVENR NIERRISEEA ITITKNEENI LPLNPKEGEK VLLIAPNESQ IHSMKFGINR
LIHENSLNNI KLDTYEYNNI GIIDDVLKEK IESSDYIIVA SLSSNANHLK PGAWNRDLPR
SVIDYGNKLN KDTVLISLRN PYDLAAYDNA KAQVVAYGFK GMDPTEGDTL FPTKSSGPNI
PASMGVVFGA VEPKGKLPVD IPSLNNDGTM NTEVNYYDYG HGITNINSLG NVNISMNKKI
NLGDNFQVKF NLSDFNEIVA GKYRAKIKFQ GEKLEFINGK VEFSGDLQTN IIDNNTLEVL
INLEEGSLKA NEVNFILEFK AIDKAELTSI EITSSELIDE KGRCFKQKYV ISEFSIEDNK
EDKPLSPDED KEDEENNEDL GNSDDNNKDE LPQTGSGVGK EFIFGLGSLS LLAGIGLKSK
RFKRK
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