Gene CPF_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0249 
Symbol 
ID4203929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp298370 
End bp299101 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content32% 
IMG OID638081133 
ProductNAD-dependent deacetylase 
Protein accessionYP_694711 
Protein GI110800837 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.390729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATA AGATAAACAA ATTAAAAGAA ATAATAAAAA ATAGTAATAA CATAGTTTTC 
TTTGGAGGAG CTGGCGTGTC AACTGAGTCT GGAATTCCTG ACTTTAGAAG TGCTAATGGC
TTATTTAATG AAAAGCTTAA TATTACTTTT ACCCCTGAAC AATTAGTTTC TCATAGTTTT
TTTGAAAGAT ATCCAGAAGA GTTTTTCAAC TTTTATAAAG CTAAACTTAT TTATCCTAAT
GCCAAGCCTA ATGATGCACA TATTGCCTTG GCTAAACTTG AAGAAATGGG AAAATTAAAG
GCTATAGTCA CTCAAAACAT AGATGGACTT CATCAAATGG CAGGGAGCAA AAATGTTTTT
GAACTTCATG GTTCAGTTCT TAGAAACTAC TGTGTAGATT GCCACACTTT CTATGATGAA
AAATTTATTC TTGAATCAAA GGGTGTTCCA AAATGTACTA AGTGTGGTGG AATAGTTAAA
CCTGATGTGG TTTTATATGA AGAGCCTTTA GATGATAATG TTATTAGAGG TGCTATTGAT
GCTATTTCTA AAGCAGATAC CCTTATAATA GGCGGAACTT CCTTAGTTGT TTATCCTGCT
GCAGGGCTTA TTAACTATTT TAGAGGAAAG AATTTAGTTT TAATAAACAA AAGTTCAACT
CAAGCTGATT CTAAAGCTGA CTTAGTTATA AATGACTCCA TAGGAAAAGT ATTAGGAAAA
GTTATTGATT AA
 
Protein sequence
MDDKINKLKE IIKNSNNIVF FGGAGVSTES GIPDFRSANG LFNEKLNITF TPEQLVSHSF 
FERYPEEFFN FYKAKLIYPN AKPNDAHIAL AKLEEMGKLK AIVTQNIDGL HQMAGSKNVF
ELHGSVLRNY CVDCHTFYDE KFILESKGVP KCTKCGGIVK PDVVLYEEPL DDNVIRGAID
AISKADTLII GGTSLVVYPA AGLINYFRGK NLVLINKSST QADSKADLVI NDSIGKVLGK
VID