Gene CPF_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0215 
Symbol 
ID4201234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp264352 
End bp265131 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content27% 
IMG OID638081099 
Productiron chelate ABC transporter ATP-binding protein 
Protein accessionYP_694678 
Protein GI110798589 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAG GGGAAAAATT ATCATTCAAT TACAAGGGAG AAAAAAATAT CATTAATGAT 
TTAAATATAG ATATAAAAGA GGGAGAAATA ACAACTATTA TTGGCCCTAA TGGAAGTGGA
AAATCAACTT TGCTAAGTCT ATTATGTGCT TTAAATAAAA GTAAAACTGG ACATGTTTAT
TTGGGGGATA TAAACATGAA CAATCTTAAA TATAAGGATA TAGCAAAGAT TTTAGCAACT
GTTCATCAAC AAAATAGTGT GCCAAAGGAT ATAAAGGTTG AGGAGCTTGT TGCCTATGGT
AGATATCCTC ATAAAGGATA TTTTAAAAGT AACAACAAGG AAGATAAAAA CATAATTAAA
TGGGCTTTAG AATGTACAGG ACTTGATGAT TTAAAACATA AGGGAGTTAT GAATTTATCA
GGGGGAGAAA GACAAAGAGC TTTTATATCA ATGGCTTTAG CTCAAAAGCC TAAAATTTTA
TTTTTAGATG AGCCAACAAC TTATTTAGAT ATTTTTCATC AAATAGAAAT ATTAGAGATT
GTAAAAAAGT TAAATAAGTA TAATGGGCTA ACTGTTGTTA TGGTTTTACA TGATATAAAT
CAAGCAATTA AATATAGTCA TAATATTGTT GTCATGAAAG ATGGAAAAAT TGTAAAAGAG
GGAAAATCAG AGAATGTAAT AGATGAAAAT TTATTAAAGG AAGTTTATAA GGTTAATGGT
GTTATTAACA AATGTAAGGA AACTGGAGAG ACTTATTTTA TACCAAAAAC TATTTGTTAA
 
Protein sequence
MIRGEKLSFN YKGEKNIIND LNIDIKEGEI TTIIGPNGSG KSTLLSLLCA LNKSKTGHVY 
LGDINMNNLK YKDIAKILAT VHQQNSVPKD IKVEELVAYG RYPHKGYFKS NNKEDKNIIK
WALECTGLDD LKHKGVMNLS GGERQRAFIS MALAQKPKIL FLDEPTTYLD IFHQIEILEI
VKKLNKYNGL TVVMVLHDIN QAIKYSHNIV VMKDGKIVKE GKSENVIDEN LLKEVYKVNG
VINKCKETGE TYFIPKTIC