| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0214 |
|---|
| Symbol | |
|---|
| ID | 4203201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 263365 |
|---|
| End bp | 264351 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638081098 |
|---|
| Product | iron chelate ABC transporter permease protein |
|---|
| Protein accession | YP_694677 |
|---|
| Protein GI | 110799906 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAAA ATAATAAGTT AAAAAGCTTA TATATAGGTT TATCAATATT AATAGTTTTA
ATTTTAATGA TAGTTTCTTT AAAGCTAGGA AGTATTGATA TAAGTTTTGG TGAACTAATA
AAAGGTCTTT TAAGTGGAAG TAATGAAGGA AATATAGGAA TAATAAAAGA TTTAAGGATG
CCGAGAGTCA TTATAGCTGC TTTAGTTGGA GGAAATCTTG CCTTGGCAGG GGTATTACTT
CAGGCAGTAA TAAGAAATCC CTTGGCTGAT CCTCAAGTAA CAGGAATATC TTCTGGAGCA
TGCTTAGTAT CATTAATATT CATAATATTT ATGCCAGCTT CAGGATCAAT AAGACCAATA
GTAGGTTTCT TTGGAGGGCT TGTTTCTTGT ATAGTTGTGT ATTTAATGGC TTATAAAAAA
GAGTTAGATA CTATGAGAAT AGTCCTTGCA GGGGCTGCTA TAAATGCTCT TTTAGGAGGT
TTATCACAAA TATTAACTAT AGGTAGTGGC GTAGGTGCAG GGAATATACA ATCTTGGATA
AGTGGAAGCT TAGCTGCCAC TTCATGGGAT GAAGTTAAAA TTTTATTTTT ATATTCAATA
ATAGGAATGG GTTTTGCATT AATTTTAGCT AAATCATGTA ATGTTATAGT TTTAGGAAAT
AAAAATGCAA AAAGTTTAGG TTTTAATTCA GATTTACAAA TGATTCTCAT AACAGTGGTA
GCTGTATTTT TAGGGAGTGT ATCAACGGCT ATTGTAGGTA TTATTTCCTT TGTTGGATTA
GTTGTACCAC ATATTTGTAG AATATTAATT GGCTCTGATC ATAGATATTT GATTCCTTTT
TCAATATTTG TTGGAGGAGC ATTAGTCTTA CTTGCAGATA CAATAGGAAG AATGCTAGTA
AAGCCATATG AAATACCAGC AGGAATAATT ATGGCAGTTA TTGGAGCACC GTTCTTCTTA
TATCTACTAA GAAGGAGTGA TATGTAG
|
|---|
| Protein sequence | MVKNNKLKSL YIGLSILIVL ILMIVSLKLG SIDISFGELI KGLLSGSNEG NIGIIKDLRM
PRVIIAALVG GNLALAGVLL QAVIRNPLAD PQVTGISSGA CLVSLIFIIF MPASGSIRPI
VGFFGGLVSC IVVYLMAYKK ELDTMRIVLA GAAINALLGG LSQILTIGSG VGAGNIQSWI
SGSLAATSWD EVKILFLYSI IGMGFALILA KSCNVIVLGN KNAKSLGFNS DLQMILITVV
AVFLGSVSTA IVGIISFVGL VVPHICRILI GSDHRYLIPF SIFVGGALVL LADTIGRMLV
KPYEIPAGII MAVIGAPFFL YLLRRSDM
|
|---|
| |