Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0212 |
Symbol | |
ID | 4202997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 261914 |
End bp | 262477 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638081096 |
Product | sortase family protein |
Protein accession | YP_694675 |
Protein GI | 110799875 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAATA AACTAGCTAA AGGATTATTT ATTTTAGGTT TAGTTATAGT TTCTACAGTT CTTATAGGAA AACTTTATAA AAGTAGTGTT GAGAAAAAAA CTTTAGAAGA GTTTAAGGAA AAGTTTAATT ATTCAGAAGA AGAGAAGAAA AAGACTTTAG AAGAAATAAA AAATGGAGAT GGAATAGCTT TAATAGATAT AGAAAAAATA GGTGTACATA CAGTTATTGC TGAGGGTAGT ACCTTAGATG TGTTAGAAAA TAACATTGGT CACTTTGAAA ATACTGCTAT GCCAGGCGAA AATGGAAATT TTAGTATTGC AGGACATAGA AATACTATAA ATAATGAGGT CTTTAGAAAT ATAGACAAGC TTCAAGTAGG AGATGAAATA AAAATCACAA CTTTAACTGA TATATTTCAG TATGAAATTA ATGAGATTTT TGTCACATCA CCTAGTGATA CTGATGTTTT GAATCAAAAT TTAGATGAGA AAACAATGAC CATAGTTACA TGTACAAATA GAGGAAAAGA CAGATACATA GTTAAAGCAA AATTAATAGG TTAG
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Protein sequence | MRNKLAKGLF ILGLVIVSTV LIGKLYKSSV EKKTLEEFKE KFNYSEEEKK KTLEEIKNGD GIALIDIEKI GVHTVIAEGS TLDVLENNIG HFENTAMPGE NGNFSIAGHR NTINNEVFRN IDKLQVGDEI KITTLTDIFQ YEINEIFVTS PSDTDVLNQN LDEKTMTIVT CTNRGKDRYI VKAKLIG
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