Gene CPF_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0212 
Symbol 
ID4202997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp261914 
End bp262477 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content28% 
IMG OID638081096 
Productsortase family protein 
Protein accessionYP_694675 
Protein GI110799875 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA AACTAGCTAA AGGATTATTT ATTTTAGGTT TAGTTATAGT TTCTACAGTT 
CTTATAGGAA AACTTTATAA AAGTAGTGTT GAGAAAAAAA CTTTAGAAGA GTTTAAGGAA
AAGTTTAATT ATTCAGAAGA AGAGAAGAAA AAGACTTTAG AAGAAATAAA AAATGGAGAT
GGAATAGCTT TAATAGATAT AGAAAAAATA GGTGTACATA CAGTTATTGC TGAGGGTAGT
ACCTTAGATG TGTTAGAAAA TAACATTGGT CACTTTGAAA ATACTGCTAT GCCAGGCGAA
AATGGAAATT TTAGTATTGC AGGACATAGA AATACTATAA ATAATGAGGT CTTTAGAAAT
ATAGACAAGC TTCAAGTAGG AGATGAAATA AAAATCACAA CTTTAACTGA TATATTTCAG
TATGAAATTA ATGAGATTTT TGTCACATCA CCTAGTGATA CTGATGTTTT GAATCAAAAT
TTAGATGAGA AAACAATGAC CATAGTTACA TGTACAAATA GAGGAAAAGA CAGATACATA
GTTAAAGCAA AATTAATAGG TTAG
 
Protein sequence
MRNKLAKGLF ILGLVIVSTV LIGKLYKSSV EKKTLEEFKE KFNYSEEEKK KTLEEIKNGD 
GIALIDIEKI GVHTVIAEGS TLDVLENNIG HFENTAMPGE NGNFSIAGHR NTINNEVFRN
IDKLQVGDEI KITTLTDIFQ YEINEIFVTS PSDTDVLNQN LDEKTMTIVT CTNRGKDRYI
VKAKLIG