Gene CPF_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0190 
Symbol 
ID4203394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp227239 
End bp228102 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content31% 
IMG OID638081071 
Product5'-nucleotidase 
Protein accessionYP_694654 
Protein GI110799595 
COG category[R] General function prediction only 
COG ID[COG2503] Predicted secreted acid phosphatase 
TIGRFAM ID[TIGR01533] 5'-nucleotidase, lipoprotein e(P4) family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACT CAAAAATTAC AGCAATTGTA TTATCAGCAA TAATAGGTAT TGGTGTTGGA 
ACTGGAGGTA CTTTAGTTTA CGAAAACAAC CAAGAAGCAA AACAAATCTC TAAGTTAGAA
CAAACAACAA AGGCTAATGC AGTGGAAGAG ATTGTTAAAG GAAATGTTTT AGCAACTTTA
TGGCAACAAA ATTCTGGAGA GGTAAAGGCT TTAAGATATG AAGCATACAA CTCTGGAAAG
AGATATGTTG ATGAATTAGT GAAAGAACCT ACTGCTAAAC CATATGCAGT TACCTTAGAT
ATTGATGAAA CAATAATAGA TAATTCACCT CATGCAGGGT ATGAAATAAA GCATAATGAA
TTATTCTCAA AGGAAAACTT TGGTGAGTGG GTACAAATGG CTGATGCAGC TGCAATAGAT
GGAGCTAAAG ACTTTACTGA TTATGCTAAA AGTAAAGGAT TTGAAGTTTT CTACGTTTCA
AATAGAAGTG AAGAAAAGGA ACTTGATGCA ACTATAAAAA ACATGCAAAA ATTAGGTTTT
GTAAATTCAG ATAAGGATCA TATACTTTTA AAAACAGATA CAAGTAGTAA AGATGCTAGA
TGGGATAAGA TAAAAGAGAA TTATAATCTT GCAATTTATT GTGGAGATAA CTTAGGTGAC
TTCCCTGATG GATATGATAA TAAGTCTAAT GAACAAAGAA GAGAAATAGT AGATAAAGAA
GCTCAATTCT TTGGAACAAA ATACATAGTG CTTCCAAATC CAACTTATGG TGATTTTGAA
AATGCCGTTT ATGGATATGA CTTCAAAAAA TCTCCAGAAC AAAAACTTGA AGATAGATTA
AATAGTATAA AGTCATTTAA ATAA
 
Protein sequence
MRNSKITAIV LSAIIGIGVG TGGTLVYENN QEAKQISKLE QTTKANAVEE IVKGNVLATL 
WQQNSGEVKA LRYEAYNSGK RYVDELVKEP TAKPYAVTLD IDETIIDNSP HAGYEIKHNE
LFSKENFGEW VQMADAAAID GAKDFTDYAK SKGFEVFYVS NRSEEKELDA TIKNMQKLGF
VNSDKDHILL KTDTSSKDAR WDKIKENYNL AIYCGDNLGD FPDGYDNKSN EQRREIVDKE
AQFFGTKYIV LPNPTYGDFE NAVYGYDFKK SPEQKLEDRL NSIKSFK