Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0190 |
Symbol | |
ID | 4203394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 227239 |
End bp | 228102 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638081071 |
Product | 5'-nucleotidase |
Protein accession | YP_694654 |
Protein GI | 110799595 |
COG category | [R] General function prediction only |
COG ID | [COG2503] Predicted secreted acid phosphatase |
TIGRFAM ID | [TIGR01533] 5'-nucleotidase, lipoprotein e(P4) family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAACT CAAAAATTAC AGCAATTGTA TTATCAGCAA TAATAGGTAT TGGTGTTGGA ACTGGAGGTA CTTTAGTTTA CGAAAACAAC CAAGAAGCAA AACAAATCTC TAAGTTAGAA CAAACAACAA AGGCTAATGC AGTGGAAGAG ATTGTTAAAG GAAATGTTTT AGCAACTTTA TGGCAACAAA ATTCTGGAGA GGTAAAGGCT TTAAGATATG AAGCATACAA CTCTGGAAAG AGATATGTTG ATGAATTAGT GAAAGAACCT ACTGCTAAAC CATATGCAGT TACCTTAGAT ATTGATGAAA CAATAATAGA TAATTCACCT CATGCAGGGT ATGAAATAAA GCATAATGAA TTATTCTCAA AGGAAAACTT TGGTGAGTGG GTACAAATGG CTGATGCAGC TGCAATAGAT GGAGCTAAAG ACTTTACTGA TTATGCTAAA AGTAAAGGAT TTGAAGTTTT CTACGTTTCA AATAGAAGTG AAGAAAAGGA ACTTGATGCA ACTATAAAAA ACATGCAAAA ATTAGGTTTT GTAAATTCAG ATAAGGATCA TATACTTTTA AAAACAGATA CAAGTAGTAA AGATGCTAGA TGGGATAAGA TAAAAGAGAA TTATAATCTT GCAATTTATT GTGGAGATAA CTTAGGTGAC TTCCCTGATG GATATGATAA TAAGTCTAAT GAACAAAGAA GAGAAATAGT AGATAAAGAA GCTCAATTCT TTGGAACAAA ATACATAGTG CTTCCAAATC CAACTTATGG TGATTTTGAA AATGCCGTTT ATGGATATGA CTTCAAAAAA TCTCCAGAAC AAAAACTTGA AGATAGATTA AATAGTATAA AGTCATTTAA ATAA
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Protein sequence | MRNSKITAIV LSAIIGIGVG TGGTLVYENN QEAKQISKLE QTTKANAVEE IVKGNVLATL WQQNSGEVKA LRYEAYNSGK RYVDELVKEP TAKPYAVTLD IDETIIDNSP HAGYEIKHNE LFSKENFGEW VQMADAAAID GAKDFTDYAK SKGFEVFYVS NRSEEKELDA TIKNMQKLGF VNSDKDHILL KTDTSSKDAR WDKIKENYNL AIYCGDNLGD FPDGYDNKSN EQRREIVDKE AQFFGTKYIV LPNPTYGDFE NAVYGYDFKK SPEQKLEDRL NSIKSFK
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