| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0179 |
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| Symbol | |
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| ID | 4201196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 212848 |
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| End bp | 214365 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638081060 |
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| Product | sodium/solute symporter family protein |
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| Protein accession | YP_694643 |
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| Protein GI | 110799712 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGT TTACGAAGTT TGATTTAGTT GTACTAGTTG TTTACTTAGG AGCTGTTCTT
TACGCAGGGT TAAAGTTCTC TAAGAAGGAA ATGAAAGGTA AAGAGTTCTT CAGAGGTGAC
GGAACTATCC CTTGGTGGGT TACTTCAGTT TCTATATTTG CAACTTTATT AAGTCCAATT
TCATTCTTAT CACTAGCTGG TAACTCTTAT AAGGGAACTT GGATAATGTG GTTTGCTCAA
CTTGGTATGT TTGTAGCAGT ACCTCTTACA ATAAGATATT TCTTACCAGT TTATAGTAGA
CTAGATATAG ATACAGCTTA CGAATATCTA GAAATAAGAT ATAAAGATAA AGGGCTTAGA
ATTCTTGGAG CTATAATGTT CATTATTTAT CAAATAGGAC GTATGGCAAT CATAATGTAT
TTACCATCAA TGGTATTAGC AAATCTTACA GGAATAAATG TTTATTTACT TATAGTAGCA
ATGGGCGTAA TAGCAATAAT TTACTCATAC ACAGGTGGAT TAAAGTCAGT TTTATGGACA
GACTTCATTC AAGGTTGTGT ACTTATAGCA GGTATCGTTT TTTCATTAAT ATTCTTAATT
TCAACAATCA ATGGTGGATT TGGAGCTATT ATGCATGAAT TAACTGAAGG AGGAAAATTC
CTATCTTCAC AAGAGCCAAT ATTCAATGCA AATATATTTA AAACAAGTGT ATTCCTATTA
ATAGTTGGGG GAGGATTAAA TACTTTCTCA TCATATATCT CAAGTCAGGA TATAGTGCAA
AGGTTTACTA CTACTACAGA TATAAAACAA TTAAAGAAAA TGACTTATGG TAACTTAGTA
TTATCATTAT TTGTAGCAAC TGTATTCTAT TTAATAGGAA CAGCTTTATA TGTTTTCTAT
AATCAAAATC CACAGTTATT ACAAACTGCT CAACAAGACC AAATTTTTGC ATCATATATA
GCATTCCAAT TACCAGTTGG TATAACAGGT ATAGTTTTAG CAGCTATATA TGCAGCAGCT
CAATCAACAC TTTCAACTGG ATTAAACTCA GTTGCAACAA GCTGGACTTT AGATATCCAA
AACTTTATAA CAAAAGATAT GTCAATGGAA AAGCAAACAA AAGTTGCTCA ATATATATCA
TTAGGTGTTG GTATAGCTTC AATAATTATG GCAGTAATCC TTGCAAATGG TGGAGTAAAC
TCAGCTTACG AATGGTTTAA CGGATTTATG GGACTTGTTC TTGGAGTTTT AGCAGGAATC
TTCGTATTAG GAATATTCTT CAAAAAAGCT ACAAAAGCAG GTGCATATGC TGGATTTATA
GCATCAGCAA TAGCTGTTGT AGTATGTAAA TATGGCGGAT TCGATGTAAG TATCTGGTCA
TACTCAATCA TATCAATAGG TGTTTCAGTT ATAGTTGGAA TGATAGTTTC ACTAATGACT
CAATCTCAAT TAGTTGATAA GAAAACTTTA AATGAAGCAA CAGTTTACTA CAATGAAAGT
GAAATAGCTA ATAGTTAA
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| Protein sequence | MQGFTKFDLV VLVVYLGAVL YAGLKFSKKE MKGKEFFRGD GTIPWWVTSV SIFATLLSPI
SFLSLAGNSY KGTWIMWFAQ LGMFVAVPLT IRYFLPVYSR LDIDTAYEYL EIRYKDKGLR
ILGAIMFIIY QIGRMAIIMY LPSMVLANLT GINVYLLIVA MGVIAIIYSY TGGLKSVLWT
DFIQGCVLIA GIVFSLIFLI STINGGFGAI MHELTEGGKF LSSQEPIFNA NIFKTSVFLL
IVGGGLNTFS SYISSQDIVQ RFTTTTDIKQ LKKMTYGNLV LSLFVATVFY LIGTALYVFY
NQNPQLLQTA QQDQIFASYI AFQLPVGITG IVLAAIYAAA QSTLSTGLNS VATSWTLDIQ
NFITKDMSME KQTKVAQYIS LGVGIASIIM AVILANGGVN SAYEWFNGFM GLVLGVLAGI
FVLGIFFKKA TKAGAYAGFI ASAIAVVVCK YGGFDVSIWS YSIISIGVSV IVGMIVSLMT
QSQLVDKKTL NEATVYYNES EIANS
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