Gene CPF_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0176 
Symbol 
ID4202638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp210223 
End bp210891 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content29% 
IMG OID638081057 
Productnitroreductase family protein 
Protein accessionYP_694640 
Protein GI110799541 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGG ATAGAAAAGA TATTATAGAT ATTTTTAATT TTAGATTTGC TACAAAGGAA 
TTTACAGGAG AAATAATACC TAAAGAGGAT ATGGAGATGA TTGCAGAAAC AGCTAGATTA 
TCTCCAAGTT CATTTGGACT AGAGCCTTGG AAGTTTCTTA TTGTAGAAAA TAAAGAATTA 
ATTAAAGAAA TTTCAGAAGT ATCTTGGGGA TTTCAAAGAC AAGCTTCAAC AACAAGTCAT 
ATTGTAATTG CTTTAACAAA GGCAGGAAGT GAAGTTAAAT ATGATTCAGA TTATATTAGA 
AACCTTTGGA TTAATACAAA AGGTGTTTCA GAAGAGTTTT TTGAAGGAAT AAAAGATGTA 
TTAAAAAACT TCCAAGTTGG AAAGTTAGAA GCTGATGAAA CAAATGAAAA ATTACTTGAA 
TGGTCAAAAA GACAAACTTA TATAGCATTA GGGAATATGA TGACAGCAGC TGCTATGAGA 
GAAATAGATT CATGTGCTAT TGAGGGATTT GATAAAGAAA AGGTAGAAGA AATATTAGCT 
AAAAAAGGGA TTTTAGATAA AGAAAAATAT GAATTAACAT ATTTAATAGC CTTTGGATAT 
AGGAAAGAAG ATCCTAACAG AAAGAAATCA AGACTTCCAA AAAGTGAAGT AATTCAATGG 
GTAGAATAA
 
Protein sequence
MKLDRKDIID IFNFRFATKE FTGEIIPKED MEMIAETARL SPSSFGLEPW KFLIVENKEL 
IKEISEVSWG FQRQASTTSH IVIALTKAGS EVKYDSDYIR NLWINTKGVS EEFFEGIKDV 
LKNFQVGKLE ADETNEKLLE WSKRQTYIAL GNMMTAAAMR EIDSCAIEGF DKEKVEEILA 
KKGILDKEKY ELTYLIAFGY RKEDPNRKKS RLPKSEVIQW VE