Gene CPF_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0167 
SymbolmscL 
ID4201551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp201085 
End bp201543 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content29% 
IMG OID638081048 
Productlarge-conductance mechanosensitive channel 
Protein accessionYP_694631 
Protein GI110800468 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAG AATTTAAAGA GTTTGCCATG AAAGGAAATG TAATAGACTT AGCTATTGGT 
GTTGTTATAG GTGGTGCTTT CGGAAAAATA GTAACTTCAT TAGTAAATGA TATTATAATG
CCTGTAGTTG GTAGCTTAGT TGGAAAAGTT GACTTCTCTA ACTTATACAT AAACTTAAGT
GGACAACAAT TTAACTCATT ACAAGAAGCT CAAGCTGCTG GTGCTGCTAC TATAAATTAC
GGACTATTTT TAAATAACTT AATTAACTTC TTAATAATAG CATTTTCTAT ATTTATAGTT
ATAAAACAAA TAAACAAGCT TAAAAACTTC ACTAAGAAAA AAGAAGAAGT TAAAGTTGAA
GCTACAGAAA AAGATTGTCC TTATTGCTAT ACTAAAATAG ACATAAAAGC TACTAGATGT
CCTCATTGTA CATCTGTTTT AGAAGAAGCT ACTAATTAG
 
Protein sequence
MWKEFKEFAM KGNVIDLAIG VVIGGAFGKI VTSLVNDIIM PVVGSLVGKV DFSNLYINLS 
GQQFNSLQEA QAAGAATINY GLFLNNLINF LIIAFSIFIV IKQINKLKNF TKKKEEVKVE
ATEKDCPYCY TKIDIKATRC PHCTSVLEEA TN