Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0167 |
Symbol | mscL |
ID | 4201551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 201085 |
End bp | 201543 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638081048 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_694631 |
Protein GI | 110800468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAG AATTTAAAGA GTTTGCCATG AAAGGAAATG TAATAGACTT AGCTATTGGT GTTGTTATAG GTGGTGCTTT CGGAAAAATA GTAACTTCAT TAGTAAATGA TATTATAATG CCTGTAGTTG GTAGCTTAGT TGGAAAAGTT GACTTCTCTA ACTTATACAT AAACTTAAGT GGACAACAAT TTAACTCATT ACAAGAAGCT CAAGCTGCTG GTGCTGCTAC TATAAATTAC GGACTATTTT TAAATAACTT AATTAACTTC TTAATAATAG CATTTTCTAT ATTTATAGTT ATAAAACAAA TAAACAAGCT TAAAAACTTC ACTAAGAAAA AAGAAGAAGT TAAAGTTGAA GCTACAGAAA AAGATTGTCC TTATTGCTAT ACTAAAATAG ACATAAAAGC TACTAGATGT CCTCATTGTA CATCTGTTTT AGAAGAAGCT ACTAATTAG
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Protein sequence | MWKEFKEFAM KGNVIDLAIG VVIGGAFGKI VTSLVNDIIM PVVGSLVGKV DFSNLYINLS GQQFNSLQEA QAAGAATINY GLFLNNLINF LIIAFSIFIV IKQINKLKNF TKKKEEVKVE ATEKDCPYCY TKIDIKATRC PHCTSVLEEA TN
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